Methylomonas sp. LL1: IVG45_07270
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Entry
IVG45_07270 CDS
T07814
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IVG45_07270 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_07270 (recD)
Enzymes [BR:
mell01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IVG45_07270 (recD)
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IVG45_07270 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
Viral_helicase1
RecD_N
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
T2SSE
nSTAND3
UvrD_C
TrwB_AAD_bind
Mg_chelatase
SRP54
AAA_18
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QPK64741
UniProt:
A0A7T0JSE8
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All DBs
Position
1503541..1505454
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AA seq
637 aa
AA seq
DB search
MNGNTVMSRIAHWVALGWLSQLDQAFAGFLQDQDGDAGETLLWAGALVSHQLGRGEVFLD
LEKLCADPGLTLAIPSDEAWQSADDETDLALSVFKARTVADWTSELAQSSLVASGQGNTP
LVLHDGRLYLRRYWRYQQILDSEISRRLQPVRQQLPASLQHSLNQLFSDNREQPDWQKIA
CVLALRARFAIITGGPGTGKTTTLTKLLSLLIELAAEESQRKLSILLAAPTGKAAARVSE
SIAIALEKLPMPEAIKQQIPKKAATLHRLLGSRPDSRGYRHHKHNPLLADIVIVDEASMI
DLEMMASLLDALPDHTQLILLGDKDQLASVEAGSVMGDLCRGAEHAAYDQTTLDWLADYA
GETLPLAPDAGSAINQQTVMLRHSHRFGSNSGIGQLARAVNTGAAGRAQDILSDTQTYAD
LKRILLSDAFDARLKQLVLAADDRPGYGEYLQVMQRQRSGDTDAHQQWAQAVLTAFDRFQ
VLCALRRGDWGVEGLNQRIEQWLFPGKKTGLWYQGRPVMITRNDYNLGLMNGDIGIALPD
AGGKLRVAFPGDQNSEPGALRWVSPMRLPDVETAFAMTVHKSQGSEFHHVALILPEVRSP
VLTRELVYTGITRAKEHFTLLESRAGIFEQAIRSSFR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaacacagtcatgagccggatagcacactgggtcgcgctaggctggctgagc
cagctggatcaggcatttgccggtttcttacaggatcaggatggcgatgccggcgaaacg
ctgttatgggccggtgccctggtcagccatcaactaggacgaggcgaagtgtttctggat
ttggaaaaactctgcgccgatcccggcttgaccctggcgatacccagcgatgaagcttgg
caatcggcggatgatgaaaccgatctggcattatcggtattcaaggcccgaacagtggcc
gactggaccagcgaactggcgcaatcgagtctggtggcaagcggtcaaggcaacacaccc
ttggttttgcacgacggccgtctgtatttacgccgctattggcgctatcaacaaattctg
gacagtgaaatcagccggcgcctgcaaccggtcaggcagcaactgccggcatccttgcaa
cacagcttgaatcaactgtttagcgacaaccgggaacaacccgactggcaaaaaattgcc
tgcgtgttggccttgcgcgcccgctttgccatcatcaccggcggccccggcaccggcaaa
accactaccttgaccaagctgttgagcctgttgatcgaactggccgccgaggaaagccaa
cgcaaactgagcattttattggcagcccccaccggcaaggccgcggcccgagtcagcgaa
tcgatagccatcgccctggaaaagctgccgatgccggaagcgatcaaacagcagattccg
aagaaagccgccaccttgcaccgcttgctgggcagccgcccggatagccggggttaccgg
catcataaacacaatccgctgctggcggacatcgtcatcgtcgacgaagcctcaatgata
gacctggaaatgatggcctcgctgctggatgcgctgcctgaccatacccagctgatcctg
ttgggcgacaaggatcagctagcctcggtggaagccggttcggtgatgggcgatttatgc
cggggagccgagcatgcggcctatgatcagactactttggattggctggcagactatgcg
ggcgaaacattgccgttagcgcccgatgcgggctcggccataaaccagcaaaccgtgatg
ctgcgccatagtcatcgtttcggctctaacagcggcatcggccaactggcgcgagccgtc
aataccggcgctgccggccgcgcccaggacattttatccgatacccaaacctatgccgac
ctcaagcgcatactgttgtccgatgcgttcgatgcgcgcttaaaacaattggtattggcg
gccgacgacaggcccggttatggcgaatacttgcaagtcatgcaacggcagcgctcgggc
gatacggacgcgcaccagcaatgggcgcaagcggtgttgacggctttcgaccgctttcag
gtgttgtgcgcgctacgtcggggcgactggggcgtggaaggcttgaatcagcgcatcgaa
caatggctgtttccgggcaagaaaaccgggctgtggtaccaaggccggccggtgatgatc
acccgcaacgattacaacctgggcttgatgaacggcgacatcggcatcgccttgccggat
gcgggcggcaaactgcgggtagcgtttccgggcgatcaaaatagcgagccaggcgcgctg
cgctgggtttcgccgatgcgtttaccggatgtggaaaccgctttcgcgatgacggtacac
aagtcgcaaggctcggaattccatcatgtggccctgatcctgccggaagtgcgcagcccg
gtattgacccgagaactggtctataccggcatcacccgcgccaaggaacattttaccttg
ctggaaagccgggccggcattttcgagcaggcaattcggtccagcttccgctag
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