Metallosphaera sedula MJ1HA: MJ1HA_1956
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Entry
MJ1HA_1956 CDS
T08286
Name
(GenBank) CRISPR-associated exonuclease Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
memj
Metallosphaera sedula MJ1HA
Brite
KEGG Orthology (KO) [BR:
memj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
memj02048
]
MJ1HA_1956
Enzymes [BR:
memj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
MJ1HA_1956
Prokaryotic defense system [BR:
memj02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
MJ1HA_1956
Subtype I-B factors
MJ1HA_1956
Subtype I-C factors
MJ1HA_1956
Subtype I-D factors
MJ1HA_1956
Type II CRISPR-Cas system
Subtype II-B factors
MJ1HA_1956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Dna2
Motif
Other DBs
NCBI-ProteinID:
BBL47846
LinkDB
All DBs
Position
1719732..1720448
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AA seq
238 aa
AA seq
DB search
MSSLTSVLKNLSLTQTLFKRRLNDKKAHERKENVIYVTDLLYCPLKPKLRERFRELTYAE
SYNPSTLQGSLIHESVERILREELNAEVEVPISKEIVIGDQTYTILGRADAIKDNVIIEV
KTSRADVGIPRSEHVLQVRIYLNLINSDPKWNNRSVQNRTYYGVLLYITPDRVTEFHIED
GISDDELSGLVQDFLYARDTPKQEWECEYCVFDRVCPNKVSLHGAKRVGRGDNDAIPL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttaacctctgtcttaaaaaacctttcccttacgcaaactctctttaagaga
cgcctcaacgacaagaaggctcatgagaggaaggagaacgttatctacgttacggatctc
ctttattgtccgctgaagcctaagctcagggaacggtttagggagctaacctacgctgag
agctataacccttcaactctccaaggttccctcatccacgaaagcgtggagaggatccta
agggaagaactgaacgctgaagttgaggtcccaataagtaaggagatcgtcataggagat
cagacttacaccatattgggtagagctgacgccattaaggacaacgtaatcattgaggtg
aagacctcaagggctgacgtgggtataccgaggtccgaacacgtcctacaggttaggatt
tacctgaacttgatcaacagtgatccaaagtggaataatcgatctgtccaaaatagaaca
tactacggggtcttgctttacataaccccggatcgagtgacggaattccacattgaggac
ggaatatctgacgacgagcttagcggattggtccaagacttcctatacgcaagggacact
cctaagcaagagtgggagtgtgagtactgcgtcttcgatagagtttgccctaacaaggtg
agccttcatggagctaaacgagttggacggggtgataacgacgctattccgttgtaa
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