Micromonospora endophytica: Jiend_23570 Help Entry Jiend_23570       CDS       T08807                                  Symbol lig_1 Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism meno  Micromonospora endophytica Pathway meno03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:meno00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     Jiend_23570 (lig_1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:meno03400]     Jiend_23570 (lig_1) Enzymes [BR:meno01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      Jiend_23570 (lig_1) DNA repair and recombination proteins [BR:meno03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      Jiend_23570 (lig_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  BCJ58935 UniProt:  A0A2W2BMD3 LinkDB All DBs Position complement(2425039..2425953) Genome browser AA seq 304 aa AA seqDB search MPADRLPVEVEGRRLELSNLDKVLYPQAGFTKGEVIDYYTRIAPVLLPHLKDRALTRIRY PNGVEGNSFFEKNAPAATPDWVRTENLPAPGSSKGRETIDYVVADDLPTLVWLANLAALE LHTPQWKVGAHPDLMVVDLDPGAPASLEQCCQVALLLRDRLADDGVDAYPKTSGKKGMQL CCPISGTQSADDVSAYARRIAQDLEREHPKLIVSRMAKNLRPGKIFIDWSQNNAAKTTVA PYSLRAEAVPSVSTPLTWDEVAAGPRGKQPGVRPFTAAEVLQRAEECGDLLGPLLHAGPE LPAG NT seq 915 nt NT seq  +upstreamnt  +downstreamnt atgccagctgaccggcttccggtggaggtcgagggacgtcgcctggagctgtccaacctc gacaaggtgctctacccacaggccggcttcaccaagggcgaggtgatcgactactacacc cggatcgccccggtgctcctgccgcacctgaaagaccgggcgctgacccggatccgctac cccaacggggtggagggcaactcgttcttcgagaagaacgcccccgccgccacccccgac tgggtacgcaccgagaacctgcccgcccccgggtcgagcaagggccgcgagaccatcgac tacgtggtcgccgacgacctgcccaccctggtctggctggccaacctggccgcgctggaa ctgcacaccccgcagtggaaggtcggcgcacacccggacctgatggtcgtcgacctggac ccgggcgccccggcgtcgctggaacagtgctgccaggtggcgctgctgctgcgtgaccgg ctcgccgacgacggcgtcgacgcgtacccgaagacgtcggggaagaagggcatgcagctc tgctgcccgatctccggcacccagtccgccgacgacgtgtcggcgtacgcccggcggatc gcccaggacctggaacgcgagcacccgaaactgatcgtgtcgagaatggcgaagaacctc cgccccggcaagattttcatcgactggagccagaacaacgcggccaagaccaccgtcgcg ccgtactccctgcgcgccgaggccgtcccgtcggtgtcgacgccgctgacctgggacgag gtggcagccggcccgcgcggcaagcagcccggcgtccgcccgttcaccgcggccgaggtc ctgcaacgggccgaggagtgcggtgatctgctcggcccgctcctgcacgccggccccgaa ctcccagccgggtga

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