Micromonospora endophytica: Jiend_47790
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Entry
Jiend_47790 CDS
T08807
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
meno
Micromonospora endophytica
Pathway
meno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Jiend_47790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meno03400
]
Jiend_47790
Enzymes [BR:
meno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Jiend_47790
DNA repair and recombination proteins [BR:
meno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Jiend_47790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCJ61357
UniProt:
A0A915X603
LinkDB
All DBs
Position
complement(4916851..4917375)
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AA seq
174 aa
AA seq
DB search
MAAAADRTLPDVIATGLDVLFVGINPGLWSAATGWHFARPGNRFWPALHRGGFTPRLMHP
SEQGELPELGLGITNMVDRASARADELTPAELLAGAQTLTAKVARYRPRWVAVVGVTAYR
IGFARPKAGFGPQPEPLADARLWVLPNPSGLNAHYTPQTLGAAFAELRQATRQQ
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcggctgccgaccgcaccctgccggacgtgatcgccaccgggttggacgtgctc
ttcgtcgggatcaacccggggttgtggtcggcggcgaccggttggcacttcgcccgcccc
ggcaaccggttctggccggcgctgcaccggggcggtttcacgccgcggctgatgcacccc
agcgagcagggtgagttgcccgagttggggctcggcatcaccaacatggtcgaccgggcc
agtgcccgcgccgacgaactgactccggccgaactcctggccggcgcgcagacgttgacc
gctaaggtggcccggtaccggccccgctgggtggcggtggtcggggtgaccgcgtaccgg
atcgggttcgcccggcccaaggcaggcttcggcccgcagccggagccgctggccgacgcc
cggttgtgggtgctgcccaatcccagcggactgaacgcgcactacacaccgcagaccctc
ggtgcggccttcgccgaactacgccaggccactcggcagcagtga
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