Massilia endophytica: LSQ66_23070
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Entry
LSQ66_23070 CDS
T09693
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K12452
CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:
1.17.1.1
]
Organism
meny
Massilia endophytica
Pathway
meny00520
Amino sugar and nucleotide sugar metabolism
meny00541
O-Antigen nucleotide sugar biosynthesis
meny01100
Metabolic pathways
meny01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
LSQ66_23070 (rfbH)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LSQ66_23070 (rfbH)
Enzymes [BR:
meny01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.1 CDP-4-dehydro-6-deoxyglucose reductase
LSQ66_23070 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
SelA
US22
Motif
Other DBs
NCBI-ProteinID:
UGQ46612
LinkDB
All DBs
Position
complement(5031274..5032599)
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AA seq
441 aa
AA seq
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MSEQQSKEQLREQIAALVRQYGALASQPRAFEPGVTVVPPAGKVVGAPEMELMVEASLDA
WLTTGRFNDQFEAKLAKLIGVQHLITVNSGSSANLVAFNTLTSPKLGARAIQPGDEVIGV
AAGFPTTVNPIIQFGAVPVFVDVELGTYNIDVSKLEAAIGPKTKAIMLAHTLGNPYNLDV
ITALCKKYNLWLVEDCCDALGSTYRGQMVGTFGDIGTMSFYPAHHITMGEGGAVFTNNYE
LKQIAESFRDWGRDCYCPPGKDNTCGKRFCWKLGTLPEGYDHKYTYSHLGYNLKITDMQA
ACGLAQIERAAGFIQARKDNFAYLKERLQSCADFLILPEATEGSDPSWFGFPMTLKPEAN
VSRVDLLTYLDQHKIGTRLLFAGNLTRQPYMIGRNYRVSGELTNTDRVMNDTFWIGVFPG
LTREMLDFTATKLEEFFGVGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaacaaagcaaagaacaactgcgcgagcagatcgcggcgctggtgcgccag
tacggcgccctggccagccagccgcgcgccttcgagcccggcgtgaccgtggtgccgccc
gcaggcaaggtggtgggcgccccggaaatggaactgatggtggaagcctcgctggacgcc
tggctgaccacgggccgcttcaacgaccagttcgaggcgaagctggccaaactgatcggc
gtgcagcacctgatcaccgtgaactcgggctcctcggccaacctggtggccttcaacacc
ctcacctcgcccaagctgggcgcgcgcgccatccagccgggcgacgaagtgatcggcgtg
gcggcgggcttccccaccaccgtgaaccccatcatccagttcggcgccgtgcccgtcttc
gtggatgtggagctgggcacctacaacatcgacgtgagcaagctggaagcggccatcggc
ccgaagaccaaggccatcatgctggcccacaccctgggcaatccctacaacctggacgtg
atcaccgccctgtgcaagaagtacaatctgtggctggtggaagactgctgcgacgccctg
ggctcgacctaccgcggccagatggtgggcaccttcggcgacatcggcaccatgtccttc
tatcccgcccaccacatcacgatgggcgagggcggcgccgtcttcaccaacaactatgag
ctcaagcagatcgccgaatccttccgcgactggggccgcgactgctattgcccgccgggc
aaggacaacacctgcggcaagcgcttctgctggaagctgggcaccctgccggaaggctac
gaccacaagtacacctacagccacctgggctacaacctgaagatcaccgacatgcaggca
gcctgcggcctggcccagatcgagcgcgcggcgggcttcatccaggcgcgcaaggacaac
ttcgcctacctgaaggagcgcctgcagtcctgcgccgacttcctgatcctgccggaagcg
acggaaggctcggacccgtcctggttcggcttccccatgaccctgaagccggaagcgaac
gtgtcgcgcgtggacctgctgacctacctggaccagcacaagatcggcacccgcctgctg
ttcgcgggcaacctgacgcgccagccctacatgatcggccgcaactaccgcgtgtccggc
gagctcaccaataccgaccgcgtgatgaacgacaccttctggatcggcgtcttccccggc
ctcacccgcgaaatgctggactttaccgccaccaagctggaagagttcttcggcgtcggc
ttctga
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