KEGG   Methanosarcina sp. WWM596: MSWHS_0429
Entry
MSWHS_0429        CDS       T03852                                 
Name
(GenBank) Replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
meq  Methanosarcina sp. WWM596
Pathway
meq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:meq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSWHS_0429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meq03032]
    MSWHS_0429
DNA replication proteins [BR:meq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSWHS_0429
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N Rad17 AAA_3 DNA_pol3_delta AAA_14 AAA_16 Mg_chelatase AAA_22 AAA_assoc_2 Phage_TAC_12 ResIII TIP49 AAA_5 nSTAND3 AAA_2 IstB_IS21 AAA_24 AAA_18 Methyltransf_31 TPR_11 AAA_7 AAA_11
Other DBs
NCBI-ProteinID: AKB17292
UniProt: A0A0E3NKI3
LinkDB
Position
513906..514910
AA seq 334 aa
MEDFKIKDEIWIEKYRPIRLNQVAGQKETIERLMSYVATKNLPHLLFSGPPGVGKTASAV
SIARELFGEDLWRENFTELNASDERGIDVVRNKIKNFAKTAPIGGASFKIIFLDEADALT
SDAQSALRRTMEKFSSNCRFILSCNYSSKIIEPIQSRCAVYRFRRLSDEAIKERLEYIAK
DQGLSITEGGYEALIYVAQGDMRKAVNSLQAAAFIDTKNPISRETIYRTTATANPDEIKN
LIETALRGNFRIARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMVLDLGLSERDIVAL
VDIIGEADFRLTEGASEKIQLEALLAHFALSRGE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggaggactttaagattaaagacgagatctggattgaaaaatacaggccaatcaggctg
aatcaggtagcagggcagaaggaaacaatcgagcgcctgatgtcctatgtggcaactaaa
aaccttccccacctcctcttttccgggcctcctggtgtcggaaaaacagcttccgcagtt
tcaattgcaagggaacttttcggggaagatttatggcgagaaaattttactgaactcaat
gcttccgatgaaaggggcattgatgtagttagaaataaaattaaaaactttgcaaaaact
gctcctataggcggagcttcgttcaagatcattttccttgatgaagccgatgcccttacc
tcggatgcacagtctgccctccgcaggaccatggaaaaattcagcagtaactgccgtttt
atcctttcatgcaattattcctccaaaatcattgaacctatccagtccagatgtgcagtt
tacaggttcaggcgactttccgatgaagcaattaaagaacggcttgaatacattgctaaa
gaccagggtttgtccatcacagaaggtgggtatgaagctctgatttatgtagctcaggga
gacatgcgaaaagctgtcaattctcttcaagctgccgccttcattgatacgaaaaatcct
atttccagagaaacaatttacaggactacggcaaccgcaaaccctgatgaaattaagaac
ctgattgagactgccctgcgcggaaatttcaggattgccagaaaagagcttaacaggttg
ctttacgaagaagggctttccggagaggatattgtgggccagatctacagggtggtttct
gaaatggataaccttatggttctggatctcggactttcggaaagggacattgtcgcactt
gtggatatcatcggggaggccgatttcaggttaaccgaaggagccagcgaaaaaatccag
ctggaagccttacttgcacatttcgctctttcaagaggagaatga

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