Chelativorans sp. BNC1: Meso_1396
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Entry
Meso_1396 CDS
T00374
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Meso_1396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_1396
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Meso_1396
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Meso_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
DnaJ_CXXCXGXG
nSTAND1
BCA_ABC_TP_C
RsgA_GTPase
AAA_33
AAA_21
AAA_23
DUF4192
Motif
Other DBs
NCBI-ProteinID:
ABG62792
UniProt:
Q11II3
LinkDB
All DBs
Position
complement(1489134..1492046)
Genome browser
AA seq
970 aa
AA seq
DB search
MPDHKSISIRGAREHNLKNVDLDLPREKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPVTGLPIESQTVSQMVDRVLALEEGTRLYILAPIVRGRKGEYRKELADLQKKGFQRV
KVNGAFYEIADVPALDKKYKHDIDVVVDRIVVRPDIATRLADSLETCLRLSEGLAVAEFA
DRPLPEAETEGANKSKNETHERLIFSEKFACPVSGFTIPEIEPRLFSFNNPAGACPACDG
LGSQRAIDPDLVVPDESAVLREGAIAPWAKSTSPYYLQTLEALGKEYGFKVSNRWKDLSE
EAQQAILHGTGERKIAFDYNDGLRSYRTTKPFEGVVSNLQRRWKETESAWMREEIERYMS
THPCPACNGYRLKPEALAVKVAGIHIGEVTQMSIRKAGAWFEALPEQLNAKQNEIAARIL
KEIRERLRFLNDVGLDYLTLSRNSGSLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLH
QRDNDRLLATLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGRVIAEGTPSEI
MANPNSITGKYLTGELSIPMPERRREIPKKRRVRVVGARGNNLKNVTAEIPLGTFTCVTG
VSGGGKSTFLIETLYKAASRRIMGSREHPAEHDRIEGLEFLDKVIDIDQSPIGRTPRSNP
ATYTGAFSPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYV
TCDVCHGKRYNRETLEVLFKGKSIADVLEMTVDEGVEFFSAVPAVRDKLTTLSRVGLGYI
HIGQQATTLSGGEAQRIKLAKELSKRATGKTLYILDEPTTGLHFHDVAKLLEVLHELVDQ
GNTVVVIEHNLEVIKTADWVLDLGPEGGDGGGELVVAGSIDDVMAQPRSYTGKFLKELLE
RRPARRQAAE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccataagtctatttccattcgcggcgcgcgcgagcacaacctgaagaatgtc
gatctcgacttgccgcgtgaaaaactcatcgtgatgaccgggctttcggggtccggcaag
tcttccctcgcattcgatacgatctatgccgagggccagcgccgctatgtagagagtctg
tccgcctatgcgcggcaattcctggagatgatgcagaagcccgatgtcgaccagatcgac
gggctttcgccggcgatttccatcgagcagaagaccacctcgcgcaatccgcgttcgacg
gtcggcaccgttaccgagatctacgattacatgcggctgctcttcgcgcgcgtgggcgtg
ccttattcgccggtgacgggtcttcccatcgagagccagaccgttagccagatggtcgac
cgcgttcttgcgctggaggaaggtaccaggctctacattctcgcgcccatcgtgcgcggg
cggaagggagaatatcgcaaggagctggcggatctacagaagaaaggctttcagcgcgta
aaggtaaatggcgcgttttatgagatcgccgacgtgccagcgctagacaagaaatacaag
cacgacatagatgtggtggtggaccgcatcgtcgtgcggcctgatatcgccacgcgcctg
gcggattcactcgagacctgcctgaggctctccgaggggctcgcggtggcggagtttgcc
gaccggccgctccccgaggcggagacagaaggcgccaacaagtccaagaacgagacccat
gagcggctgatcttttcggagaaattcgcctgtccggtctcgggcttcaccattcccgag
atcgagccccggctcttctccttcaacaatccggctggcgcctgccccgcctgcgacggg
ctcggcagccagcgcgccatcgacccggaccttgtggtaccggacgaaagcgcggtgctg
cgcgagggggcgatcgctccctgggcgaagtccacctcgccctattacctgcagacgctt
gaggcccttggcaaggaatacggcttcaaggtgagcaaccgctggaaggacctgtcggaa
gaggcgcagcaggcgattctgcatggcacgggcgagcgcaagatcgccttcgactataat
gacgggctgcgcagctaccgcaccacaaagcctttcgagggcgtggtgagcaacctgcag
cggcgctggaaggagacggaatcggcctggatgcgcgaggaaatcgagcgctacatgtcc
acccatccctgccccgcctgcaacggctatcggctgaagccggaggcgctggcggtgaag
gtcgccggcatccacatcggcgaagtcacccagatgtcgatccgcaaggccggcgcctgg
ttcgaggcacttcccgagcaacttaacgccaagcagaacgagatcgccgcgcgcattttg
aaggaaatccgcgagcgcctgcgcttcctgaacgatgtcggcctcgactatcttacgctc
tcgcgcaattcaggctcgctttcgggtggcgagagtcagcgcatccggcttgcctcgcaa
atcggctcgggcctcaccggcgtgctctacgttctcgacgagccttccatcggccttcac
cagcgcgacaatgaccggctgctcgccacgcttcgccacctgcgcgatcttggcaacacg
gttatcgtggtcgagcatgacgaggatgcgattttgaccgcggattatgtggtggatatc
ggcccggcggccggcgtccatggcgggcgcgtgatcgcggagggaacgccgagcgagatc
atggcgaacccgaactctattaccggaaaatatctcacgggcgagctttccattccgatg
ccggagcgccgccgcgagatcccgaagaagcggcgtgtgcgcgtcgtaggtgcacgcgga
aacaatctgaaaaacgtgacggccgagatcccgctcggcaccttcacctgcgttaccggc
gtttcgggcggcggcaagtccaccttcctgatcgagacgctctataaggctgcctcacgc
cgtatcatgggctcgcgcgagcacccggccgagcatgaccgcatcgaggggctggagttc
ctcgacaaggtgatcgatatcgaccagtcgcccatcgggcgcaccccgcgttcgaacccg
gccacctataccggcgctttctcacccatccgcgactggttcgccggcctgccggaggcg
aaggcgcgcggctatcagccgggccgtttctccttcaacgtcaagggcgggcgttgtgag
gcttgccagggtgatggcgtgatcaagatcgagatgcacttcctgccggatgtctacgtc
acctgcgatgtctgccacggcaagcgctacaaccgcgagacgctggaggtgctcttcaag
ggcaagtccatcgcggacgtgcttgagatgacggtggacgaaggcgtggagttcttctcc
gcggtgcctgccgttcgcgataagctcaccacgctgtcgcgcgtcggcctcggctatatc
catatcgggcagcaggccaccacgctttcaggcggcgaggcgcagcgcatcaagcttgcg
aaggagctgtccaagagggcgaccggcaagacgctgtatatcctcgacgagccgacgacg
ggcctgcatttccatgatgtggccaagctgctggaggttctccacgagctggtcgaccag
ggcaatacggtggtcgtgatcgagcataatctggaggtcatcaagacggcagattgggtc
ctcgacctcgggcccgagggaggcgacggcggtggcgagctggtggttgccggctccatc
gacgatgtcatggcccagccacgctcctatacgggcaagttcctgaaggagttgctggaa
agacgcccggcacggaggcaggcggcggaatga
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