Manihot esculenta (cassava): 110609246
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Entry
110609246 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
Organism
mesc
Manihot esculenta (cassava)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf_UBZ
zf-C3HC4_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110609246
NCBI-ProteinID:
XP_043810088
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All DBs
Position
2:9405359..9423680
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AA seq
1395 aa
AA seq
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MGFDNECILNIQSLAGEYFCPVCRLLVYPNEALQSQCTHLYCKPCLTYIVSTTRACPYDG
YLVREEDSKLLTESNKGLAETIGKITVHCLYHRSGCTWQGPLSDCTSHCSGCAFGNSPVV
CNRCGIQIVHRQVQEHAQNCPGVQTQAQSDAAQDATTTGTAPVGDQTGNTATQAQASQTA
ASTLPGQDPNQQANQTAQPQSVAQGTVPSAEQWYQQQQQYQQYYQQYLGYDPYQQYYPYQ
QQAVPQYQQPQVYMQQPQLPQTQVQPQAQLQTQPQPYPHVQLPATAPPANQPQVNPQQQT
HTTAQPQSQTQSQIHPPPHGQQQPQSQLHPQTHPVHHHPQHIQMPQYPQPHSQVQHPPPQ
VQAQAHPQLHPQYPVPQPQAQAQAQAQAQAQPQPQPQPQPQPQGMPQTHAQAQHVQPHPQ
PFTSQPNLPVNPPYLQPQPQYSSANAVTGHNSYPQPQPQQQMQLGGPQHPAHLYPQGGPQ
PQSHLAQMQSQFPQQPPVLRPPQAHGPIQNPQQPGLLPSPGQVPNVAPAQQPPVHPQVHH
PGLPHQRPVMQSVQQPVHQQYMQQQPSSGQALGPVQNQVPQQGAYIQQQLQSQLRPLGPL
PSFQQPSHAYPQPHHNVSLPHGTQPYQGQNLGRPMVPPHGVPTQPHPHLSSSMPVRPMQV
DAGQSGNTLRTNNQDQLFSEQQSGATTRPMSERPGDHIIEKSSEAESTHESVKRDPNDLA
VASRVGADAGEVKTVKSESILKLAVDERKSREEIQDLGGENGELSIKQVKKEPKEAIDEQ
KDVSNTDHRRFEHSVLEDNEMKGRPQLKTPPLHEGEHFEDRGMKSQKDRNVTPQRSGGFA
LHSQLQGEGLVQPSHLVPISHGPSVLQQRPVGSPLLQVPPPGPPHHMQLPGHPSAPSRPL
DSGHMPHPGQPLNPLPEHPQQPLYNQSLSAEISPAGISGLGSTSIFGRGPSHYGTQGHGH
TLPGERTASYGHESDMFPNQRPNYMDGRRIDPLGQQAGALRMNGAPGPDSSVLGLRDDRI
KPLPDDHMNSFPQDPSRIVDRAEFEKDAKHFPRSSHLDADSIKEYGNHLPPSRPLDRLPH
SFGMDFPLKTPEKGLHAMNYDSGMKLKPLGGSAPSRFFPPYHHDGVMHPNDMGERPIGFH
DNTAGRQPDAAPTPQDLFGPVPRYGRRYMDGLAPRSPGRDYPGVTSHGFGAFPGFDDIAG
RESHRFGDSFHVNRFPVFPGHLHRGEFEGPGQDGFPNHSRRGEHLDPNNLPGHMRMGERF
GFGAFPGPARMGELPGSGNFFHPRLGEPGFRSSFSLKGIPGDGGNYPGDLESFDSSRRRK
ASSMGWCRICKFDCETVEGLDTHSQTREHQKMAMDMVLTIKQNAKKQKLAPSDHSSLDDA
SKSRNASFEGRGNKN
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgataatgagtgcatactgaacattcaatccctggctggagagtacttctgt
cctgtttgtcgtctgttagtctatccaaatgaagctttacagtctcaatgcactcacctt
tactgtaagccatgcttaacatatattgtgagcactacccgtgcttgcccttatgatggc
tacttggtgagagaagaagattccaagcttcttactgaatcaaacaaaggtcttgctgaa
accatcggcaaaataacagttcattgtctataccataggagtggatgcacgtggcagggt
cctttgtctgattgtacttctcattgttctggatgtgccttcggtaattctcctgttgtg
tgtaacaggtgtggaattcaaattgtgcatcgtcaggtgcaggaacatgcacaaaattgt
cctggtgtgcaaactcaagctcaatctgatgctgctcaggatgccacaaccacagggaca
gctcctgttggtgatcagacaggaaatactgccactcaagcccaggcttctcaaaccgca
gcatccacattgcctggacaagatcccaatcagcaggccaaccaaactgcacagccccag
tctgtcgcacagggtactgtgccctcagcagaacagtggtatcaacagcaacaacaatat
caacaatactaccagcaatacctgggatatgatccttatcagcaatactacccttatcaa
cagcaagcagttccacaataccaacaacctcaggtttatatgcagcagcctcaactcccc
caaacccaagttcaacctcaggcgcaattgcaaacacaaccgcagccatatccacatgtt
cagctgcctgctactgcaccacctgcgaaccagccacaagtcaatccgcagcaacaaact
cacactacagctcagccacagtctcaaacacaatcacagatacacccaccaccccatggc
caacagcaacctcagtctcagctgcacccacaaacccatcctgttcaccatcatccacag
cacatacaaatgcctcaatatccgcagccccattcacaggtgcagcatccaccgccacaa
gttcaagcacaggctcatcctcaactccatccccagtatcctgttcctcaaccacaggca
caagcacaagcacaagcacaagcacaagcacaacctcaacctcaacctcaacctcaacct
caacctcaaggtatgccacaaacacatgctcaagctcaacatgtacagcctcatccacag
cccttcacttctcaaccaaacctgccagtgaatcctccttatctgcagcctcagccacaa
tattcatctgccaatgcagttacaggccataactcttatccgcaaccacagcctcaacag
caaatgcagctgggaggtccgcaacatcctgctcatttgtatcctcaaggtgggcctcaa
ccacaatcacatcttgcccaaatgcagagtcagtttcctcaacaacctcctgtgttgcgg
ccaccacaagctcatggtccaattcaaaaccctcagcaaccaggattattaccttcacct
ggtcaggtccctaatgttgctcctgcacaacagccaccagtgcatccccaggttcaccat
cctggacttcctcatcaacgccctgttatgcagtcagttcagcaaccagttcatcagcag
tatatgcagcaacagccgtcttctggacaagcactggggccagttcagaatcaagtgcct
cagcaaggtgcttacatacagcaacaactgcagtctcaattacgtcccctggggccattg
ccatcattccagcagccttctcatgcctacccacagccacatcacaatgtttcattacca
catggcacgcaaccttatcaaggccaaaatctgggaagacctatggtgccacctcatgga
gtgccaactcagccacatccacacttgtcttccagcatgccggtcaggccaatgcaggtt
gatgcaggacagtctggaaacaccttgaggaccaacaaccaagatcaattgttttctgaa
caacagtctggggctactacaagaccaatgtctgagcgaccaggggatcatattattgag
aaaagttcagaagctgaatctactcatgaaagtgttaaaagggatccaaatgatttggct
gttgcttctagagttggggctgatgcaggtgaggtaaaaactgtaaaatctgaaagcatt
ttgaagttagcggttgatgaaaggaagtccagggaggaaatccaggatcttggaggggag
aatggagagttatcgattaagcaggtgaagaaagaacctaaagaggccattgatgaacag
aaagatgtttctaatactgaccacagaagatttgaacattctgtgttggaggacaacgaa
atgaagggcaggcctcagttgaaaactcctccactgcatgaaggtgaacactttgaagac
cgtggtatgaaatcacaaaaggacaggaatgtgactcctcaacgttctggaggctttgct
ttgcacagtcagttgcaaggtgagggcttggtgcagccctctcatttggttcccatttct
catggaccttctgtcctccaacaacggcctgttgggtccccattgttacaagtacctcct
cctggacccccacaccacatgcaattacctgggcatccatctgctccatctaggcctttg
gattctggacatatgcctcatcctggacaacctttgaatccactccctgaacatcctcag
caacctctttacaatcagtctctcagtgctgaaatctctcctgctggcatttcaggcctc
ggttctacttcaatctttgggaggggtcctagtcattatggtacgcaaggacatggacac
actttgccaggtgaacgaactgcatcgtatggccatgagtctgacatgtttccaaatcag
aggcccaattatatggatggcagaagaatagatccacttgggcaacaagctggtgcattg
agaatgaatggtgccccagggccagactcctcggtgcttggattgcgggatgatcgaatc
aagcctttgccagatgatcatatgaattcatttccacaagatccatcgcgaattgttgat
cgtgctgagtttgaaaaagatgccaagcatttccctaggtcttctcatttggatgctgat
tcaattaaagaatatgggaatcacttgcccccttcaagacctcttgataggctacctcat
agttttggcatggatttcccactgaaaacccccgagaagggactgcatgctatgaattat
gattctgggatgaaattgaaacctcttggtggctctgccccttcaaggttttttcctcct
tatcatcacgatggtgtaatgcatcccaatgatatgggagaaagaccaattggttttcat
gacaatacagcgggcagacagccagatgctgctccaactccacaagatctttttggacca
gttcctagatatggtcgtcgttatatggatggtttggcccctagaagtccaggtagggat
taccctggtgtaacctcacatggatttggggcctttcctggatttgatgatattgctggc
agggaatcacatcggtttggtgattcatttcatgttaataggtttccagtttttcctggc
catttacacaggggtgagtttgagggtcctggtcaagatggatttcctaaccattctagg
aggggtgaacatttagatcctaataacttgcctggtcatatgcgtatgggagagcgtttt
ggttttggtgcgttccctggtcctgcaaggatgggagaattgcctggatcagggaatttc
tttcatccccgacttggtgagcctggatttaggagcagcttttccctcaaaggaattcct
ggggatggtggaaactatccaggtgacttagaatcttttgatagttcgaggaggaggaag
gcatctagcatgggatggtgtcgcatttgtaaatttgactgtgaaacagttgaaggctta
gacacacattcacaaacgagggagcatcaaaagatggctatggatatggttttgacaatc
aagcagaacgccaaaaagcagaaattagcccccagtgatcattcctcacttgatgatgca
agcaagtcaaggaatgccagttttgagggccgtggaaataagaattaa
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