Manihot esculenta (cassava): 110613676
Help
Entry
110613676 CDS
T05761
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110613676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110613676
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110613676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
110613676
NCBI-ProteinID:
XP_021610602
LinkDB
All DBs
Position
4:complement(35469345..35479109)
Genome browser
AA seq
727 aa
AA seq
DB search
MMYGDPQNQHQQPGGEFLRGPPPQPPMMRQLSSSSATLNPAEYYHNSSASEPPLPPYDAH
GDIFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTALQPTPAAAIDMLPTTAYS
DNPSTTFAAKFVHASLNKNRCSINRVLWTPNGRRLITGSQSGEFTLWNGQSFNFEMILQA
HDQAIRSMVWSHNDNWMVSGDDGGAIKYWQSNMNNVKANKSAHKESVRDLSFCRTDLKFC
SCSDDTTVKVWDFARCYEERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRE
LCSFHGHKNTVLCVKWNQNGNWVLTAGKDQIIKLYDIRAMKELESFRGHRKDVTALAWHP
FHEEYFVSGSFDGSIFHWLVGHETTQIEVTSAHDNSVWDLAWHPIGYLLCSGSNDHTTKF
WCRNRPGDPARDKFNMGQNQSYGEPNPALAGHLPGNFPLPEPPITPGPFAPGLTRNEGTI
PGVGAAMPLAIPSLDTSGQGEQKQSVPISMPLGAPPLPPGPHSSLLAANQQQGYQNNPQQ
MQQQQHQALPQQMPPLPMPPPNMQQLQPPSHLNLLPHPHIPRPPQVPPHGMPSPVPSSMP
GSLPVPSSMTASHPLQMPGPMGMQGTMNQMVPPVPRGHFMGMNPMHSGSLSTSAAAPVGA
FRNGLPNMQGPSNATGNQMYPQGGSFKRPQGGQMPMMPGFNPYQSGSQLGMPPPLQPGPP
PHSHTPQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggtgatcctcaaaaccagcaccagcagccgggaggagaattcctcaggggt
ccaccacctcagccgccgatgatgcgacagctctcatcctcttcagctactctcaatccc
gcggaatattaccacaactcctcagcctcagagcctcctctccccccttacgacgctcat
ggtgacatttttggtgcaaaaaggatgagaaagcttacccaaaggagagcagtcgattac
acaagtaccgttgtccgctatatgcagattcgtatgtggcagcgagattcaagagacaga
acagcattgcaacctactccagcagcagcaattgatatgttaccaacaactgcctattct
gacaatccatcaacaacttttgctgcaaagtttgtccatgcatctctaaacaagaatcgt
tgttcaattaatcgggttttgtggactcctaatgggagacgtctaatcacaggctctcaa
agtggggaattcactctttggaatggacagtcctttaactttgaaatgattcttcaggcc
catgatcaagcaatcaggtccatggtatggagtcataatgacaactggatggtctctggt
gatgatggcggtgcaattaagtactggcagagcaacatgaataatgttaaggctaataaa
tctgcacataaagaatcagttcgcgacttaagcttctgtaggacagatttaaagttctgt
tcttgctctgatgatactactgtgaaagtttgggactttgctcgatgctatgaagagcgt
tcattaactggccatggttgggatgtgaagagtgttgactggcatcctacaaaatcttta
ttggtctcaggtgggaaagataaccttgtaaaactttgggatgctaaaactgggagagag
ctttgctcatttcatggccacaaaaatacagtgctttgtgtcaaatggaatcaaaatggt
aattgggttctaactgctggaaaggatcaaatcattaagctttatgatattagagctatg
aaggagcttgaatctttccgtggacaccgcaaagatgtgactgcattggcttggcatcca
tttcatgaagagtattttgttagtgggagttttgatgggtccattttccattggcttgtt
gggcatgaaacaacccagattgaagttactagtgctcatgataatagtgtgtgggatctt
gcatggcatcctattggatatcttctttgcagtggtagcaatgatcacacaacaaagttt
tggtgcagaaataggccaggggaccctgctcgtgataaatttaacatgggtcagaaccaa
agttatggtgaaccaaaccctgcccttgctggtcacttgcctggtaattttcctctacct
gaaccaccaataactccaggaccatttgctcctggattgactcgaaatgaaggaaccatt
ccgggtgttggagctgcaatgccattagcaattccatctcttgatacatcaggtcagggg
gagcagaaacagtctgttccaatttctatgcctctaggagcccctcctctccctcctggc
ccacattcatctcttcttgctgccaatcagcagcagggatatcaaaataatcctcagcag
atgcagcaacagcaacaccaagctctccctcagcaaatgcctcctttgcctatgcctcca
ccaaatatgcagcagctacaaccaccttcacatttaaacctgctccctcatccccatata
cctcgccctccccaagttccccctcatggtatgccatcacctgttccatcttctatgcca
ggatccttgcctgtgccttcatcaatgactgcatcacacccattgcaaatgcctggtcca
atgggaatgcagggcacaatgaatcagatggtccctccagtgccacgaggccatttcatg
ggcatgaatcccatgcactcgggatccttatccacaagtgcagccgctccagtaggggcc
tttcgtaatggcctgccaaatatgcaaggcccatcaaatgcaaccgggaaccaaatgtat
ccacaaggtggatcatttaagcgaccacaaggtggacagatgccaatgatgccagggttt
aatccctatcagtctggtagtcaacttggtatgcctccaccactacaaccaggtcctccg
ccacattcccacacacctcagtag
DBGET
integrated database retrieval system
