Manihot esculenta (cassava): 110613697
Help
Entry
110613697 CDS
T05761
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00750
Vitamin B6 metabolism
mesc01100
Metabolic pathways
mesc01240
Biosynthesis of cofactors
Module
mesc_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
110613697
Enzymes [BR:
mesc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
110613697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
110613697
NCBI-ProteinID:
XP_021610671
LinkDB
All DBs
Position
1:complement(34638290..34639656)
Genome browser
AA seq
311 aa
AA seq
DB search
MADIGVVTVYGNGAIYETTTKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAV
MALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYID
ESEVLTPADEENHINKHNFRIPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNIVEAVR
HVRSVMGDIRVLMNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA
MMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLND
DKVERYANRSE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcggagtcgtaaccgtctacggtaacggcgctatctatgaaaccaccacg
aagaaatcccccttctccgtcaaggtgggccttgcccagatgctccgcggcggcgttatt
atggacgtcgtcaacgccgatcaagcccggatagccgaggaagcaggtgcctgcgccgtc
atggccctggagcgtgttcccgctgacatccgggcgcagggcggcgttgcccgcatgagc
gacccgcaattaatcaaagaaatcaaacaatccgtcaccattcccgtgatggccaaagcc
cgtattggccatttcgtggaggcccaaatactcgaagcaatcggaattgattacattgac
gagagcgaagttctcactccggccgacgaagaaaaccacattaacaagcacaatttccgg
attccttttgtatgcggctgcagggatctcggagaagccctccgaagaatccgagaggga
gcggccatgatcagaaccaaaggcgaggctggcactggcaatatcgtcgaggcggttagg
cacgtgaggtccgtcatgggagacattagagtcttgatgaacatggatgacgatgaggtt
tttactttcgccaagaagattgcggctccttacgatttggtgatgcagaccaagcagtta
gggcgacttccggtggtgcatttcgcggcaggtggggtggcgaccccagcggatgcagcc
atgatgatgcagctgggatgcgatggggtgtttgtgggttctggagtctttaagagtggg
gatccggcgagaagagcacgtgcaattgtgcaggcagtgacgcattatagtgatcctgat
gtgcttgcggaggtgagctgtggattgggcgaggctatggttggaattaatctgaatgat
gataaggtggaaaggtatgccaatcgatcagagtaa
DBGET
integrated database retrieval system
