Manihot esculenta (cassava): 110615184
Help
Entry
110615184 CDS
T05761
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110615184
03012 Translation factors [BR:
mesc03012
]
110615184
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110615184
mRNA cycle factors
Stress granule specific factors
110615184
Translation factors [BR:
mesc03012
]
Eukaryotic type
Initiation factors
eIF-4
110615184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
ATP-grasp_5
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
110615184
NCBI-ProteinID:
XP_021612626
LinkDB
All DBs
Position
5:complement(4802517..4811684)
Genome browser
AA seq
1902 aa
AA seq
DB search
MSFNQSRADKSETQYRKPGRSGGSNQQRTSLGAYGKGGGGPAPSPSSSSVSSNRSFKKSN
NVQGEQSRVNLPAVSSSDSANVSASRNVQNGAHAQSSLHGASDAPVSSGTAKPNETPITQ
RSSRAVPKAPTSQSATLISDTASPMTPAKAPGDASKAFPFQFGSISPGFMNGMQIPARTS
SAPPNLDEQKRDQALHDTLRSVPPLPTPAPKQQVPRKDIGVVDHSSAGEAHPMAKAKKDV
QVSTTLPVSQTQKPSVHPLPMSSMQMPFHQQPVPVQFGSPNPQIQSQGVTPSSLQMPMPM
AALPMGNAPQVQQPMFVQGLQPHPMQPQGIMHQGQGLGFAPPMGPQMPPQLGNLGIGMSS
QYPQQQGGKFGGPRKTTVKITDPKTHEELRLDKRTDTYADGGSSALRPHPNMPPQTQPIP
SFAPAHPINYYSNSYNPNNLFFQTSSSLPLTSGQIAPNSQPPRFNYTVSQGPQNVSYVNP
PVLNSLPVNKSGTSMHGVVETSNLDHTRDAHSFVSSASSGTVQVKVKPTATFIGEKAVDS
LSCKSSSAIEKDGYGKPSRPSLEANLSDVQKDSEKVPEISLQHSKPGSEPSASKLLPVES
RQAVAGAGDNMPSNSSLPPASVQSEELMLAGGNTEGKRNSTLSRSNSIKDHQVKQGKKGY
IQTQNQIGGQSSSIASFPSHNIEQGISSNSGALSSSIVGEGLTELRQESVPVTSASTFDV
SEDKFDEYGKGFNGIPSEVSGSQGIVDVADVARPAKVDDAFLLERLNNGTPGSERQGEKG
LPKGPEQDGNRLDISSESICKRSIDLISQSKRGSAMTGTAFGNEIQNLETMQELDESVTC
HAENDRLSNNVGASTSRNLESADVGKFSADGNLTLDASSSKSDNLGDKEVAVVKSGALDH
QFVPVTTLDLSEATSKNEVVENSGIGLVSLAVSSSKDKAVDLTRTKGTSAKLKKKRREIL
QKADAAGTTSDLYMAYKGPEEKKESVASPEVVENISTSSNMTQALVRAPELDSLTSETSI
QNKAELDDWEDAADISTPNLETSDDGEQAFGGFMQHGKVENANTAKKYSRDFLLKFSEHF
TDLPDNFEITSDIAEVFSLSHFVDRDSYPSPGRVVDRSNSGSRMDRRGSGLADDDRWSKL
PGPFGMGRDLRVDIGFGGSAGFRPGQGGNYGVLRNVRAQTPQYAGGILSGPMHSLGPQGG
MQRNSPDADRWQRATNFFQQKGLIPSPQTPLQMMHRAEKKYEVGKVSDEEEAKQRQLKAI
LNKLTPQNFEKLFEQVKEVKIDNTTTLTGVISQIFDKALMEPTFCEMYAHFCYHLAAELP
DFTEDNEKKNFKRILLNKCQEEFERGEREQEEANKADVDGEMKQSAEEREEKRVKARRRM
LGNIRLIGELYKKKMLTERIMHECIKKLLGQYQNPDEEDVEALCKLMSTIGEMIDHNKAK
EHMDFYFDMMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQE
RQHQSGRLARNPSINPPARRTPMDFGPRGSAMLSSPNSQMGGFHGLPSQVRGYGTQDVRF
EERQSYEGRTLSVPLSRPLGDDSITLGPQGGLARGMSIRGPPVMTSAPAADISSSPGDSR
RIAAGSNGFSAVSERPVYSSREEFVPRYAPDRIAVPAAYDQVSAQDRNMSYVNRDPRNQD
HTFDRPLATSPPARAQVQSFGQNIPSEKVWPEEHLRDKSMAAIKEFYSARDEKEVALCIK
ELNFSSFHPAMIALWVTDSFERKDMERDVLAKLLVNLARSPDGILSPPQLVKGFESVLTT
LEDAVNDAPRAAEFLGRMFAKVVLENVVSLEEIGLLLYEGGEEPGRLLEFGLAGDVLGSS
LEMIKAEKGEGFLNELLMSSKLHLEDFRPLDPFRSRILENFI
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaagggccgataagagcgagacgcagtatcggaaaccaggacga
tccggaggttctaatcagcagcggacctccttaggtgcttacggtaagggcggcggcggg
cctgccccttcaccgtcttcttcttctgtttcttccaatcggagtttcaagaagtctaac
aatgttcaaggagaacaatctagggtaaacttaccagctgtgagttcttccgattctgct
aatgtttctgcgtcccgcaacgtacagaatggtgcccatgcacaatcttcattacatgga
gcttccgatgcacctgtttcaagtggtactgctaagccaaatgaaacacccatcactcag
aggagtagccgagctgttcctaaggctccgacttctcaatccgccaccttgatctctgat
actgcgtcacctatgacgcctgctaaagcccctggagatgcatctaaggcattcccattt
cagtttgggtccataagtcccggttttatgaatgggatgcagattcctgctcgaacgagc
tcagctcctcctaatttggatgagcagaagcgtgaccaggcgctccatgatacacttaga
tctgtgcctccattgccaactcctgctcctaagcaacaagtaccaaggaaggatataggt
gttgttgaccattctagtgctggggaggctcatccaatggccaaagccaagaaggatgtc
caagtctcaactacactgcctgtgagccagacacaaaaaccatctgttcatccactacct
atgtcttccatgcaaatgccttttcaccaacaaccagtccctgtgcagtttggcagccct
aatccgcagattcagtcacaaggtgtcacgccaagttcacttcaaatgcctatgccaatg
gcggcattaccaatgggaaatgctcctcaagtgcaacagccaatgtttgttcaaggtctt
caaccccatccaatgcagcctcagggaataatgcatcagggccagggattgggttttgca
cctcccatgggtcctcagatgcctcctcagttaggaaacttaggaattgggatgtcatca
caatatcctcaacaacagggggggaaatttggtggtcctcgtaaaacaactgtcaagatt
actgatccaaaaacacatgaagagctgaggcttgataagcggacagacacatatgcagat
ggtggatcatcagcccttaggcctcatcctaatatgcctcctcaaacccagccaattcca
tcatttgcgcctgctcatccaatcaattactattccaattcttataatccaaataatcta
ttttttcaaacttcaagctctttaccactgaccagtggccagatagctcccaattctcag
ccgcctaggtttaactacactgttagccaaggtccacaaaatgtatcatatgtgaatcca
cctgtccttaattctttgcctgttaacaagtctgggacttcaatgcacggtgtggtagaa
acatcaaatttggatcatactcgtgatgcacatagttttgtctcatctgcttcttcagga
acagtacaggtgaaggtgaaaccaacagctacttttattggggagaaagctgtggactca
ctgtcatgcaagagttcatctgcaattgaaaaggatggatatggtaaaccttcaaggccc
tctttggaagctaacttatctgatgttcaaaaggattcagagaaagttccagaaatttct
ttgcagcattcaaaacctggtagtgaaccttcagcatccaagttgttgcctgtggaatct
agacaagctgtggcaggtgctggtgataatatgccttccaattcgtcattacctcctgca
tctgttcaatctgaggaattaatgcttgctgggggaaacactgaaggcaaaagaaactcc
actctgagtaggtcaaactccattaaggatcatcaggtgaagcaaggcaaaaaagggtat
atccagacccagaatcagattggcgggcaatctagctcgattgcaagctttccttctcat
aatatagaacagggaatatcttccaacagtggagctctttcttcatcaatagttggtgaa
ggtttgacagaattacgccaggaatctgttccagtgaccagcgcttcaacttttgatgtt
tctgaagacaagtttgatgaatatggaaagggcttcaatggtattccttctgaagtctct
ggttctcaaggaattgttgatgttgcagatgttgctcgtccagctaaggtagatgatgct
ttcctgctggaacgtcttaataatggaactccaggatctgaaaggcaaggagaaaaggga
ttgcctaaaggtcctgaacaagatggtaaccgcttggacatctcttcagagtctatttgt
aaaagatctatagacttaattagtcaaagtaaaaggggatcagctatgacaggtacagct
tttggcaatgagattcagaatttagagaccatgcaggagctagatgaatctgtgacttgc
cacgcagaaaatgacaggttgtccaataacgtgggtgcttctacatccaggaatttggaa
tccgcagatgttggaaagttctctgctgatggcaacctgacattggatgcatcttcaagc
aagagtgataatctgggtgataaagaagtagctgttgtgaaatctggagcactggatcat
caatttgtcccagttacaactctggatctttcagaggcaacatcaaagaatgaagttgtg
gaaaatagtggtattggcttggtctcccttgcagtatccagttccaaggacaaagctgtt
gacctgactagaacaaagggtacctctgccaaactgaagaagaaaagaagagaaattctt
caaaaagctgatgctgcagggacaacttctgatctttacatggcatataaaggtcctgaa
gagaagaaagaaagtgttgcttctcctgaagtagtggagaacatctcgaccagttctaat
atgactcaggcacttgtacgtgcacctgagttggactccctgacaagtgagactagtatc
caaaataaagctgagctagatgactgggaagatgctgctgacatctctacaccaaatctg
gaaacttcagatgatggggagcaggcttttggcggatttatgcagcatggcaaagttgag
aatgctaatacagccaaaaaatattccagagattttcttttgaaattctctgagcatttt
actgatcttccagataattttgaaattacatctgatattgctgaggtttttagtctttct
cattttgttgatcgggattcatatcctagccctggacgagttgtcgacaggtcaaacagt
ggatctcggatggaccgtcgtggaagtgggctggctgatgatgatcgatggagtaaacta
cctggcccttttggcatggggagggatttacgtgtggatattggttttggaggtagtgca
gggtttcgacctggccaaggaggaaattatggtgttttaaggaatgtgcgtgcacagact
cctcagtatgcaggaggtatcctgtctgggcctatgcattcacttggtcctcagggaggt
atgcagagaaatagcccagatgccgataggtggcagcgtgctacgaattttttccagcaa
aagggattgattccttctcctcaaactccattgcagatgatgcacagggctgagaaaaag
tatgaagtgggtaaagtgtcagatgaagaagaggcgaagcaaaggcagttgaaagctatc
ttgaacaagctaactcctcagaattttgaaaaactttttgagcaagtgaaagaggttaag
atagacaatactaccactctcactggtgtcatctcacagatctttgacaaagccttaatg
gagcctactttctgtgaaatgtatgctcacttctgctatcatctggctgcagagttgcct
gattttactgaagataatgaaaagaaaaatttcaagagaatacttcttaacaagtgccag
gaggaatttgagagaggggagagagagcaagaagaagctaataaagctgatgtggatggt
gagatgaaacagtctgcagaggaaagagaagaaaaaagagttaaggcacgaagaagaatg
cttggcaacataagactaattggggagttgtataagaagaaaatgttgactgagagaata
atgcatgaatgcatcaaaaagctcctgggtcagtatcagaatcctgatgaggaagatgtt
gaggcgttatgcaagctaatgagcacaattggagagatgattgaccataacaaagccaag
gagcatatggatttctattttgatatgatgacaaagctatcaaacaacatgaaactgtct
tcaagggttaggttcatgttgaaggatgccattgatctgagaaagaacaaatggcagcag
aggaggaaggttgaagggccaaaaaagatagaggaagtacacagagatgctgcacaagaa
cgacaacatcaatctggtaggttggctcgcaatcctagcatcaatccccctgctaggagg
acacctatggactttgggccaagaggatcagcgatgttatcttccccaaattctcagatg
ggtggtttccatggtttgccttctcaggttcgtgggtatgggacccaggatgtacgtttt
gaggagaggcagtcatacgaaggtaggactttgtcagtccccttgtctcggcctcttggt
gatgattcaattactttgggtccccaaggtgggctagccagaggaatgtccattagaggg
ccacctgtaatgacaagtgctcctgcagccgatatttcctctagcccaggtgactcgaga
agaattgcagctggttcaaatggttttagtgctgtgtctgagagaccagtttacagttca
agggaggaatttgtcccaagatatgctccagatagaattgcagttccagcggcttatgat
caagtgagtgctcaagatcgtaatatgagttatgttaacagggatcctcgtaatcaagat
cacacttttgatagaccccttgcaacatcaccacctgcacgagctcaggtacaatctttt
ggccaaaatattccatcagaaaaggtgtggcctgaagaacacctgcgagacaagtcaatg
gcagcaattaaagaattttacagtgccagagatgagaaagaagtcgctttatgcatcaag
gaattgaatttctcaagtttccatcctgcaatgattgcactatgggtgactgattcattt
gagaggaaggacatggaaagagatgttctggctaaacttcttgtcaatcttgcgaggtct
ccggatgggatattaagtcctccccagctcgtcaaagggtttgagtcggttctcaccact
ttggaggatgctgtgaatgatgccccgagagcggcggaatttcttggccgtatgtttgca
aaagtcgtattagaaaatgtggtgtctttggaagaaattggactgctattatatgaaggt
ggggaggagccaggtcgtctccttgaatttggattggcaggggatgttcttggaagtagt
ttggagatgataaaagcggagaaaggagagggtttcttaaatgagctcctaatgagttcc
aaattgcatctggaggatttccggcctctggatcctttcagatcaaggatactagaaaat
tttatttag
DBGET
integrated database retrieval system
