Manihot esculenta (cassava): 110615319
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Entry
110615319 CDS
T05761
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110615319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110615319
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
110615319
Complex B
110615319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
110615319
NCBI-ProteinID:
XP_021612834
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Position
5:complement(5678771..5682527)
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AA seq
205 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRIKEHLGQ
AAAYQQVGAAYNQHLLAQRPRLPVLPTPVMPIAGNPQLTANTSLVPGIRPPVLPRPVPGA
PGYVSAPAMPQMVAPPGAPSIPGHVSGPRFPMGIPPTTAPGSMPAPTASSGAPSMVPPTY
QANPAAPTSGSLDSFSNAPASEANH
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattattgtgactattgtgacacttatttgactcatgattctccatctgtt
agaaaacaacacaatgcaggttataagcacaaggcaaatgtgagagcctactatcaacag
tttgaggagcaacaaacccagagtttaattgaccaaagaataaaggaacatcttggccaa
gcggcagcatatcagcaggttggagctgcatacaatcagcatttactagcacagaggccc
cgtcttccagttctaccaacaccagtaatgcccattgcagggaatccgcagttaactgca
aatacatcactagtccctggaattaggcctcctgttctgccaagacctgtgcctggtgca
ccaggttatgtgtctgctccagccatgccacaaatggtggcaccgcctggtgctccttcc
atacctggtcatgtaagtggtccaaggtttcccatggggattcccccaacaactgctcct
gggagtatgccagcacccactgcttctagcggtgccccttccatggttccacctacgtat
caagcaaatcctgcggcacccacaagtggaagcttagacagcttcagtaatgctccggct
tctgaggctaatcattag
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