Manihot esculenta (cassava): 110615571
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Entry
110615571 CDS
T05761
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110615571
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110615571
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WDR54
PROPPIN
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
110615571
NCBI-ProteinID:
XP_021613196
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Position
5:5826006..5831791
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AA seq
489 aa
AA seq
DB search
MYFVPVRASIDEMGYAMSRLEIDSEHCDGAKTRDDITNGQRSHESLDNWDREISMITNSK
SRPHERLARVTPGKRELPVSTVKMLAGRESNYSGRGRFSAADRCHMLGRYLPVNGPWLID
QMTSRAYVSQFSADGSLFVAGFQGSHIRVYNVEKGWKVQKNILAKSLRWTVTDTSLSPDQ
RFLVYGSMSPIVHIVDVGSATTDSLANITGVHDGLDFSANGDEGYSFGIFSVKFSTDGRE
LVAGSSDDSIYVYDIEQNKLSLQISAHASDVNTVCFADESGHLIYSGSDDNLCKVWDRRC
FIARGKPAGVLVGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMASNASCHLGLRNY
EWDYRWMDYPPQARGLKHPGDQSVVTYRGHSVLRTLIRCYFSPLYSTGQKYIYTGSHDSC
VYIYDLVTGDQVAVLKHHKSPVRDCSWHPDYPMLVSSSWDGDVVKWEFPMHGEATIPATK
KRIWRRQFY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgttcctgtccgagcatcgatagacgaaatgggttatgcaatgagtagactg
gagattgattctgaacattgtgatggagctaagaccagagatgatatcactaatgggcag
aggtcccacgaatcattggataattgggatcgtgaaatttccatgatcacgaactctaaa
tccaggcctcatgaacgcctggcccgagtgacacctgggaagcgggagttgcctgtttcc
actgttaagatgttggctggtcgcgaaagtaattattcaggtagagggaggttttcggca
gctgatcgttgtcatatgcttggcagatatttaccagtcaatggtccttggctgattgat
caaatgactagccgggcctatgtctcacaattctcagctgatggttctctgtttgtggct
gggtttcagggaagccatattagagtatataatgtggagaaggggtggaaagttcagaag
aacattcttgccaaaagtttgcgttggacagttactgatacatctctgtcaccagatcag
cgcttccttgtctatggtagcatgtcacctattgtccatattgttgatgttgggtctgca
actacagattcacttgcaaacatcacaggggttcatgatggattggacttttctgcaaat
ggtgatgagggctattcttttgggatcttctctgtgaaattttctactgatggacgtgaa
cttgttgcgggaagtagtgatgattcaatttatgtctatgacattgaacaaaataagctc
tcacttcaaatttctgcacatgcgtctgatgttaacactgtatgttttgctgatgaaagt
ggccatcttatttattctggaagtgatgataatctctgtaaggtgtgggataggcgttgc
tttattgctagaggaaagccagcaggagtcctagtgggacacctagaaggcattacattt
attgacagtcgtggtgatggtcgttatttcatttctaatggtaaagatcagaccatcaaa
ctttgggatatccggaaaatggcttctaatgcttcttgccatttagggctaagaaactat
gaatgggactacagatggatggactatccaccacaggcaagaggtttgaaacatccaggt
gatcaatcagttgttacatatagaggtcattctgtcttgcgtacccttattcgctgctac
ttttcccccttatatagcactggccagaagtatatatacacgggctctcatgattcttgc
gtttatatatatgacttggttactggagaccaagttgcagtgctcaaacaccataaatca
cctgtaagagactgtagttggcacccggattatccaatgcttgtaagctcttcatgggat
ggggacgttgtgaaatgggaatttccaatgcatggggaagctacaatacctgcaaccaag
aagaggatttggagaagacaattttattga
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