Manihot esculenta (cassava): 110628623
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Entry
110628623 CDS
T05761
Name
(RefSeq) WD repeat-containing protein WDS homolog isoform X1
KO
K22382
WD repeat-containing protein 26
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110628623
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110628623
CTLH complex
110628623
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
RMC1_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
110628623
NCBI-ProteinID:
XP_021631089
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Position
12:complement(3424375..3428634)
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AA seq
543 aa
AA seq
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MEFMIMEREKADESSGENSVVMENSATMIGPKGMIKQHEFVRVIIQSLYSLGYRKSASCL
ESESGISYKSVDLELLESQIPEGNWNICIDTLNGIKELVDETRASALFLVFKQCMLECLS
CGDDSLALAVLRKKVPALLGRENICNLAYSLLNLKKKDLSNLDENSIFEQRRRLLTELEK
LLPPPTVLPERRLEHLVETAVTAQIDSCMYHNSQEEVSLYEDHCCTREQIPTETIQILTE
HENEVWFVQFSNNGEYLASSSSDCTAIIWKVMEGERLTFKRTLRSHQNPVSFVAWSPDDT
KLLTCGNVEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRLVCGSSDPEKGICMYDC
DGNEIKAWRGTRMPKVLDLAVTPDGEHLISVFSDKDIRIFNLVTNAERVISEEHPITSLS
VSINSKFFIVNLNSQEIHLWDVAGKWEKALRYKGHKQHKYVIRSCFGGLNSSFIASGSEN
SQVYIWNRRNPKPIEVLSGHLMTVNCVSWNPRRHQMLASASDDHTIRIWGPSQSKNIQHE
KLI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatgatcatggaacgggagaaagctgatgaaagctctggtgaaaatagtgtg
gtaatggagaattcagctacaatgattggcccaaaaggcatgataaaacagcatgaattt
gtaagagttataattcagagcctttattccttgggttacagaaagtccgcttcttgtttg
gaatcagaatccgggatttcatacaaatctgtggatttggagttgctggagtcacaaata
cctgaaggaaattggaatatatgcattgatacccttaatggaataaaggagttggtggac
gagacacgagcttcagctttgtttcttgtgttcaaacagtgtatgttagagtgtctgagt
tgtggagatgactctctggcactggctgttttgcggaaaaaggttcctgcattattaggg
agggagaatatatgcaatcttgcttatagtctccttaacttgaagaagaaggacttgagt
aacttggatgaaaattccatatttgagcagcggagaaggttgttgacagagttggaaaaa
ttgcttcctcctccaactgtgctgccggagagaaggttggaacatctagttgaaactgct
gttacagctcaaattgattcatgtatgtatcacaattcacaggaggaagtttcactttat
gaggatcattgctgtacaagagaacaaatacccacagagaccattcagattttgactgag
catgagaatgaagtgtggttcgtacaattctctaataatggagagtacttggcctcttca
tcaagtgattgtacggccatcatatggaaggtaatggaaggcgagaggctaacttttaag
cgcaccttgcgaagccaccaaaatccagtgtcctttgtggcttggagccctgatgatacg
aagttactaacatgtggaaatgtggaagttctcaagctgtgggacgtggaaacaggtaca
tgcaagcatacatttggagatcatggcttcattgtcagctcatgtgcttggtttcccgat
tcaaagcgtcttgtctgtggcagttctgaccctgaaaaaggcatctgcatgtatgactgt
gatgggaatgagataaaagcatggaggggcacaaggatgcctaaggttttggatcttgct
gtgacgccagatggagaacaccttatcagtgtattttctgataaggacattcggatattc
aacttggtaaccaatgctgaacgagtcatatctgaggagcacccaatcacttccctgtca
gtttccattaacagcaagttctttattgtcaatcttaatagccaagagatccatttgtgg
gatgttgctggaaaatgggagaaggcattaagatataagggccacaaacaacacaagtat
gtcatacgatcctgctttggtgggttgaatagctcatttattgccagtggcagtgagaat
tcacaggtctatatctggaatcggcgaaacccaaagccaatagaggttttatctggccat
ttaatgacagtgaactgtgtgagttggaaccctcgaaggcatcaaatgctagcatcagca
agtgatgatcatacgatccgtatatgggggccaagccaatccaagaatatacagcatgag
aagctcatttga
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