Aquibium oceanicum: BSQ44_09300
Help
Entry
BSQ44_09300 CDS
T04603
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meso
Aquibium oceanicum
Pathway
meso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSQ44_09300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meso03400
]
BSQ44_09300
Enzymes [BR:
meso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSQ44_09300
DNA repair and recombination proteins [BR:
meso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSQ44_09300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APH71546
UniProt:
A0A1L3SQ60
LinkDB
All DBs
Position
complement(1877732..1878592)
Genome browser
AA seq
286 aa
AA seq
DB search
MGIHQADLRELLLFLADSGADEALEEAPVDRFAESQARLARPAPEPVPAEPAREPRRRLG
EAPAGPPVAPRQAAPPAAIPDEAQAARARELARSAASMEDLRAILAGFDGCNLKFTAKNL
VFADGNPKADIMFVGEAPGRDEDVEGLPFVGRSGKLLDRMLAAIGLDRSSAYIANVIPWR
PPGNRTPTPLETELCRPFIERQVELANPKVLVTLGGPSAKVLLGATEGVLRLRGNWRVHR
TASGLEIPAMPTLHPAYLLRNPAHKRLAWRDFLEIKARLRLQGPAP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccaccaggccgacctgcgggaacttctgctgtttcttgccgacagcggcgcc
gacgaggcgttggaggaggcacccgtcgaccgtttcgccgagagccaggcgcggctggca
cgccccgcgcccgagcctgtcccggcagaacccgccagggagccgcggcgacgcctcggc
gaagcaccggccggccccccggtcgcaccccggcaagctgcgcctccggccgccattccc
gacgaggcgcaggccgctcgcgcgcgcgaactcgcccgctcggcggcgtcgatggaggac
ctgcgcgcgatcctcgcagggttcgacggctgcaatctcaagttcaccgccaagaacctc
gtcttcgccgacggcaatccgaaggccgacatcatgttcgtgggcgaggcgcccgggcgc
gacgaggatgtggagggcctgcccttcgtcggccgctcggggaagctgctcgaccgcatg
ctggccgcgatcggcctcgaccggtcgagtgcctacatcgccaacgtcattccctggcgc
ccgccgggaaaccgtacgccgaccccgctggagaccgaactgtgccggcccttcatcgag
cgacaggtcgaactcgccaacccgaaggtgctggtgacgctgggcggaccatccgccaag
gtgctgctcggcgccacggagggggtcctgcgcctgcgcggcaactggcgcgtccaccgg
acggcatccggcctggagatccctgccatgccgacgctccatcccgcctacctgttgcgc
aacccggcccacaagcggctcgcatggcgcgattttctcgaaatcaaggcgaggctgcgg
cttcagggtcccgcaccctag
DBGET
integrated database retrieval system
