Methylobacterium sp. AMS5: Y590_23755 Help Entry Y590_23755        CDS       T04283                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism meta  Methylobacterium sp. AMS5 Pathway meta03030   DNA replication meta03410   Base excision repair meta03420   Nucleotide excision repair meta03430   Mismatch repair Brite KEGG Orthology (KO) [BR:meta00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Y590_23755    03410 Base excision repair     Y590_23755    03420 Nucleotide excision repair     Y590_23755    03430 Mismatch repair     Y590_23755  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:meta03032]     Y590_23755    03400 DNA repair and recombination proteins [BR:meta03400]     Y590_23755 Enzymes [BR:meta01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Y590_23755 DNA replication proteins [BR:meta03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Y590_23755 DNA repair and recombination proteins [BR:meta03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Y590_23755    NER (nucleotide excision repair)     GGR (global genome repair) factors      Y590_23755    MMR (mismatch excision repair)     DNA ligase      Y590_23755   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Y590_23755 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT HHH_5 Motif Other DBs NCBI-ProteinID:  AMB47981 LinkDB All DBs Position complement(5169797..5172241) Genome browser AA seq 814 aa AA seqDB search MPRTPLSAAVEALSEEAAQARHAELSRAIERANDLYYNEDAPELTDADYDALRQELEAIE AHFPALTGTTEASAGVGAKPSEKFAKVRHAVPMLSLGNAFADEDVEEFVARVRRFLNLPA EAAVAFTAEPKIDGLSLSLRYEAGRLVTAATRGDGEVGENVTANALTVDDIPETLSGEGI PDVLEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFA YAWGEVSEPFADTQSAVLERFHGWGLPVNPRTKLCRSAEEMIAHYRAIEAERAGLGYDID GVVYKVDDLGFQRRLGFVSRAPRWALAHKFAAQEAITELLAIDINVGRTGSLNPLARLKP VTVGGVVVSNATLHNEGYVQGVGADGEPIREGRDIRVGDTVIVVRAGDVIPKVRDVVLDK RPADAVPYVFPDTCPACGSRAVRELNPRTKKLDAIRRCTGGLICPAQGLERLKHFVSRNG FDLEGFGQTYIEVLFEAGLVKQPADLFRLEFEPLKAAIVARREALSAQRRTEGEPAPKKP TKKKGEEEDKAIKNLLASLDARRKIPLNRFLFALGIPQIGESTAKALAKRFPDMPALRAA LAAATREQAGQDWLELSALPRIGPGTRDRLFETLDPLPGEAMQDLSLGARLRGRLAPSQR EAVLAHYGSEDRADAALERAASQRPGDAYRLFADDGEIGPVATDSLIQFFSEPHNDAAVR ALLEEVGTEPLAATTSAAAFAGKTVVFTGTLEKMTRSEAKATAERLGAKVSGSVSAKTDL VVAGPGAGSKLKDAERHGVKVVSEDDWLAMLAEA NT seq 2445 nt NT seq  +upstreamnt  +downstreamnt atgccgcgcacgcccctttccgccgccgtcgaagccctcagcgaggaagccgcccaggcg cgccatgccgagctgtcgcgggcgatcgagcgggcaaacgatctctactacaacgaggac gcgcccgaactcacggacgcggattacgatgccctgcgccaggagctggaggcgatcgag gcgcatttccccgcgctgaccggcaccaccgaggcgagcgcgggcgtcggcgccaagcct tcggagaaattcgccaaggtccgccacgcggtgccgatgctgtcgctcggcaacgccttc gccgacgaggacgtcgaggagttcgtcgcccgcgtgcgccgcttcctgaacctcccggcc gaggcggcggtcgccttcaccgcggagccgaagatcgacgggctgtcgctgtcgctgcgt tacgaggcgggccggctcgtcaccgcggcgacgcggggcgacggcgaggtcggcgagaac gtcaccgccaacgcgctgacggtggacgacatcccggaaacgctctccggcgagggcatt cccgacgtgctggaggtgcgcggcgaggtctacctgtcgcacgccgatttcgcggccatc aacgcgcgccaggaggcggcgggcaagccactcttcgccaatccgcgcaacgctgcggcc gggtcgctgcgccagctcgatccggcgatcaccgcctcgcgccccttgcgcttcttcgcc tatgcctggggcgaggtctccgagcccttcgccgacacgcaatcggcggtgttggagcgg ttccacggctggggcttgccggtgaacccgcggaccaagctgtgccgctcggccgaagag atgatcgcgcattaccgcgccatcgaggcggagcgggcgggtctcggctacgacatcgac ggcgtcgtctacaaagtggacgacctcggcttccagcgccgactcggcttcgtcagccgc gcgccgcgctgggcgttggcacacaaattcgcggcgcaggaggcgatcaccgaactcctc gccatcgacatcaatgtcggccgaaccggctcgctcaacccgctcgcgcggctcaagccc gtcaccgtcggcggcgtggtggtctcgaatgcgacgctgcacaacgagggctacgtgcag ggcgtgggcgccgacggcgagccgatccgcgagggtcgcgacatccgcgtcggcgacacc gtgatcgtggtgcgcgcgggcgacgtcatcccgaaggtgcgggacgtggtgctcgacaag cgcccggccgatgcggtgccctacgtcttcccggacacctgcccggcctgcggcagccgg gccgtgcgtgaactcaacccgcgtacgaaaaagctcgacgcgatccgccgttgcaccggc gggctgatctgcccggcgcaggggctcgagcggctgaagcacttcgtctcgcgcaacggc ttcgacctcgaagggttcggccagacctatatcgaggtgctgttcgaggccggtctcgtg aagcagcccgccgacctgttccggctggagttcgagcccctgaaggcggcgatcgtcgcc cggcgcgaagcgctgtccgcgcagcgccgcaccgagggcgagccggcgccgaagaaaccg accaagaagaagggtgaggaggaggacaaggcgatcaagaacctgcttgcctcgctcgac gcccgccgaaaaatcccgctcaaccgcttcctgttcgccctcggcatcccgcagatcggc gaatcgacggccaaggcgctggccaagcgctttcccgacatgcccgctctgagggcggcc ctcgcggcggcgacgcgggagcaggcgggccaggactggctcgagctctcggcgctcccg cggatcggacccggcacccgcgaccggctgttcgagaccctcgatccactgcccggcgag gcgatgcaggacctcagcctcggcgcccgcctgcgggggcggctcgcgccatcccagcgc gaggcggtgctggcccattacggcagcgaggacagggccgacgcggcgctggagcgggcg gcctcccagcggcccggcgacgcctaccggctattcgcagacgacggcgagattggcccc gtggcgacggactcgctgatccagttcttctccgagccgcataacgatgcggcggtgcgg gcgctgctcgaagaggtgggaaccgagccgcttgcggccacgacctcggcggcggcgttc gccggcaagacggtggtgttcaccggcaccctcgaaaagatgacccgcagcgaggccaag gccaccgccgagcgcctgggcgccaaggtctccggctcggtctcggctaagaccgacctc gtggtcgccggccccggcgccggctcgaagctcaaggacgccgagcgtcacggggtgaag gtggtctcggaggacgattggctggcgatgctggcggaggcgtaa

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