Methylobacterium sp. DM1: C0214_01215
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Entry
C0214_01215 CDS
T05461
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metd03009
]
C0214_01215
Enzymes [BR:
metd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
C0214_01215
Ribosome biogenesis [BR:
metd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C0214_01215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWI87090
LinkDB
All DBs
Position
261319..262719
Genome browser
AA seq
466 aa
AA seq
DB search
MKGRPPHRGSGAKRGPGGYTPRPGTGPRTSAKDAAQRAARNRGDDVSDRSPWGDDAVPES
APRPPRKPRTAAPRADASWERAGPPAARAPTAKSTRADSSRAKPPRVEAPRAESPAPPAG
PTRREQRAAASATLASGVQTLTVAPDEAGMRIDRFLGARFPQLPFTRVQSIVRKGELRVD
GKRAKPNDRLEPGSSVRVPPLKLEQPADRPRSAAKIDGDAEFLRSLILYEDADMMILNKP
FGLAVQGGSGTVRHVDGLLEALTGPDGQRPRLVHRLDKDTAGCLIVAKTRLAAATLAKSF
RSRAARKIYWALVAGVPRTRQGRVSTYLVKDEPTDADARMRVAKHGDDGASHALTYYATV
DQAAQKLAWLSLKPVTGRTHQLRAHAAHIGHPIVGDPKYFDVENWELPGGIQNRLHLLAR
RIVIPHPRTGQPVDVSAPLPPHMAQSWNLLGFDAARYDPIVEAPEA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacgtcctccacatcgcgggtccggcgcgaaacgcgggcccggcggctacacg
ccgcgccccggcacgggaccgcgcacctccgccaaggacgccgcgcagcgcgccgcgcgc
aaccgcggcgacgatgttagcgaccgctcgccctggggcgacgacgctgtgccggagagc
gcgccgcgcccaccgcgtaagccgaggacggccgccccgagggcggatgcttcctgggag
cgcgccgggccgccggctgctcgagcccccactgccaagtccacacgagccgattcctcg
cgggccaagcccccacgggtcgaagctccgcgggccgagtcccctgccccgcctgccggc
ccgacccggcgtgagcagcgcgccgccgcctcggcgacgctggcgagcggcgtgcagacc
ctgaccgttgcccccgacgaagccgggatgcgcatcgaccgcttcctcggcgcgcgcttt
ccgcagcttcccttcacccgcgtgcagagcatcgtccggaagggcgagttgcgggtggac
ggcaagcgcgccaagccgaacgaccggctcgagccgggatcgagcgtacgggtgccgccg
ctcaagttggagcagccggccgaccggccgcgcagcgccgccaagatcgacggggatgcc
gagttcctgcgttcgctgatcctctacgaggacgcggacatgatgatcctcaacaagccg
ttcgggctggcggtgcagggtggctcgggcaccgtgcgccatgtcgacggcctcttggag
gcgctgaccgggccggacgggcagcgcccacgcctcgttcaccgcctcgacaaggacacc
gccggctgcctgatcgtcgccaagacacggctcgccgcagcgacgctggccaagagcttc
cgctcccgcgccgcgcggaagatctactgggcgctggtggccggcgtgcctcgcacccgc
cagggccgggtctcgacctatctcgtaaaggacgagccgaccgatgccgacgcgcgcatg
cgggtggccaagcacggcgacgacggcgcgagccacgcactgacctactacgccaccgtc
gatcaggcggcgcagaagctcgcttggctctcgctgaagccggtgacgggccggacgcac
cagttgcgcgcccacgccgcgcatatcggccacccgatcgtcggcgacccgaaatatttc
gacgtcgagaattgggagctgcccggcggcatccagaaccgcctgcatcttctggcccgc
cgcatcgtgatcccgcatccgcgcacgggccagccggtcgatgtcagcgcgccgctgccg
cctcacatggcccagagctggaacctgctcggcttcgatgccgcgcgctacgacccgatc
gtcgaggcgccggaggcctga
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