Methylobacterium sp. DM1: C0214_21160
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Entry
C0214_21160 CDS
T05461
Name
(GenBank) RNA-binding protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metd03009
]
C0214_21160
Enzymes [BR:
metd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C0214_21160
Ribosome biogenesis [BR:
metd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C0214_21160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AWI90513
LinkDB
All DBs
Position
complement(4462569..4464503)
Genome browser
AA seq
644 aa
AA seq
DB search
MTDNPDPSPAVPADQAAAPEGERIAKTIARAGIASRRDAEAMIEAGRVTLNGKVLTSPAI
NVTEADRITIDGEPLPVRERTRLWLLHKPRGVVTTARDPEGRQTVFDGLPDDLPRVVAIG
RLDINTEGLLLLTNDGGLAKVIAHPDTGWLRRYRVRAFGDITQADLDRLKKGVTVDGMEY
GPVEATLDRVQGDNLWLTLGLREGKNREVKRILEHLGLSVNRLIRLSFGPFQLGDLEVGL
VEEIRTKVLKEQLGKSLAEQAGVDFESPVREAIAPFGSPKATKAASPAGRSRPGARDEGR
DQERSEPRSGARGGAAGRPPRDPARPAAPRAAARPAPRAPSPTVWRADDETRPRASKVPR
RGMDPKTARAAAAERGRERVGAIQAAGERRVLVERLQPTPETPAPEPHRRVRFRREEERP
EPQERPRQERSYQERSYQERPQQERGYQERSRDDRREDRPRRDAPTGDARPRRHEAGAAG
SPERRGPPRERQTERQAEGRPFRERSEGRPARDRGEGAPRRERPAEGGAPERRGPPRDRP
RAAEGERPARPPRGEGGGFRKGPGAGPGGKPGFKGGARDGARGDFKGGPKGAPRGGPRGD
FKAGGRPGGGRPGGKPGGAGGRPGGGKPGPRGGGRPGRPPRGDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaatccagacccctccccggccgtacccgcggaccaagccgccgcgcccgag
ggcgagcgcatcgccaagaccatcgcccgtgccggcatcgcctcccgccgcgacgccgag
gcgatgatcgaggccggccgcgtcaccctcaacggcaaggtcctgacctcgccggcgatc
aacgtcaccgaagccgaccgcatcacgatcgacggcgagcccctgcccgtccgcgagcgc
acccggttgtggctgctgcacaagccgcgcggcgtcgtcaccaccgcccgcgatccggaa
gggcgccagacggtgttcgacgggctgcccgacgacctgccgcgggtcgtcgccatcggc
cggctcgacatcaacaccgaggggctgctgctgctcaccaacgacggtgggctggccaag
gtgatcgcccatcccgataccggttggctgcgccgctaccgggtgcgcgccttcggcgac
atcacccaggccgatctcgaccggctcaagaagggtgtcaccgtcgacggcatggaatac
ggccccgtcgaggccaccctcgaccgggtccagggcgacaacctctggctcaccctcggc
ctgcgcgagggcaagaaccgcgaggtcaagcgcatcctcgaacatctcggcctctccgtg
aaccggctgatccggctctcgttcgggccgttccagctcggcgacctcgaagtcggtctg
gtcgaggagatccgcaccaaggtgctgaaggagcagctcggaaagagcctcgccgagcag
gccggcgtcgatttcgagagcccggtgcgcgaggccatcgccccgttcggaagccccaag
gcgacgaaggccgcttcacccgccgggcggagccgtccgggtgcccgcgacgagggccgc
gaccaggagcgttcggaaccgcgctcgggcgcccgcggcggagcggccggccgtccgccg
cgcgatcccgcacgccctgccgccccgcgcgccgccgcgcgccctgccccgcgggcaccc
tcgccgaccgtgtggcgggccgacgacgagacccgtccgcgcgcgagcaaggtgccgcgt
cggggcatggacccgaagactgcccgcgcggcggcggccgagcgcggccgcgagcgggtc
ggcgcgatccaggcggccggcgagcgccgggtgctggtcgagcggctccagccgacgccg
gagactcccgcccccgagccgcatcgccgggtccgcttccgtagggaggaggagcggccc
gagccgcaggagcgtccccgccaagagcgttcttaccaagagcgttcttaccaggagcgc
ccccagcaggagcgcggctaccaagaacgcagccgcgacgatcggcgcgaggatcggccg
cgccgagacgcgccgacaggcgatgcccgtccccgccgccacgaggctggggcggccggc
tcgcccgagcggcgtggcccgccgcgcgagcgccagaccgagcgccaagccgagggccgt
ccgttccgggagcggagcgagggccgtcccgcgcgcgaccgcggcgagggtgcgccccgc
cgggagcgtcccgccgaggggggcgcgccggagcgccgcggccccccgcgcgaccgaccc
cgcgccgccgagggcgagcggcccgcccgcccgccgcgcggcgagggcggcggtttccgc
aaggggccgggtgccggtccgggcggcaagcccggcttcaagggcggcgcccgcgacggg
gccagaggcgacttcaaaggcggtcccaagggagcgcccaggggcggcccgcggggagac
ttcaaggccggcggacgaccggggggcgggcgtcccggcggaaagcccggcggtgccggt
ggccgtcccggcggtggcaagccggggccgcgcggaggcggtcgtcccggccgtccgccg
cgcggcgacgcctag
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