Methanothermobacter sp. EMTCatA1: tca_01529 Help Entry tca_01529         CDS       T05328                                  Symbol ligB Name (GenBank) DNA ligase B   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mete  Methanothermobacter sp. EMTCatA1 Pathway mete03030   DNA replication mete03410   Base excision repair mete03420   Nucleotide excision repair mete03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mete00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     tca_01529 (ligB)    03410 Base excision repair     tca_01529 (ligB)    03420 Nucleotide excision repair     tca_01529 (ligB)    03430 Mismatch repair     tca_01529 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mete03032]     tca_01529 (ligB)    03400 DNA repair and recombination proteins [BR:mete03400]     tca_01529 (ligB) Enzymes [BR:mete01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      tca_01529 (ligB)     6.5.1.6  DNA ligase (ATP or NAD+)      tca_01529 (ligB)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      tca_01529 (ligB) DNA replication proteins [BR:mete03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     tca_01529 (ligB)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      tca_01529 (ligB) DNA repair and recombination proteins [BR:mete03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      tca_01529 (ligB)    NER (nucleotide excision repair)     Other NER factors      tca_01529 (ligB)    MMR (mismatch excision repair)     Other MMR factors      tca_01529 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-ProteinID:  BAZ99575 UniProt:  A0A223ZHH3 LinkDB All DBs Position 1420322..1421992 Genome browser AA seq 556 aa AA seqDB search MELAEVYHRLESTTKRLEKTEILAELLRSVDKELLPDVTILMLGRVFPIWSEEELGVGIK LLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFSQPLTVEFVYSRLKAL ASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIARAFEVDP ALVERAHMLTNDLGMVAAVAREEGEPGLGRLNLEPGRPVKPMLAQLASSIESAITELGRA FCETKYDGIRVQIHRCGDEISIFTRRLENITAAVPEILEGVEEALPADDYIVEGEIIVTM DGRPASFQYILQRVRRKYDVERLTREVPLSLFLFDVLYHREPLIDEPLRHRREVLESILS EIPGRVEASRMVDVGPDNLDDALWLFEESIREGHEGIMIKDTEAPYIPGIRGKKMLKFKA EPETLDLIVVGGTYGRGKRAHLVGSYLLAARDEDSGDLVTVAHVATGLDDETLQQLSERM EKLAIERKGRKLWVRPEIILEVAYSEIVKSPEYESGYSLRFPVVKRIRDDLCLDDVDTVG RIESLFQSGQPDQPGQ NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atggaacttgcagaggtataccacagacttgaatcaaccacaaaacgccttgaaaagact gaaatacttgcggaactcctgaggagtgttgataaggaacttctgcccgatgtaacaata ctgatgcttggcagggtgtttccaatctggagtgaggaggaacttggggttggcataaag ctgctcatgaaggcaatatccctggttgtgggggtttcgatggatgaaatcgaggacgaa ataagggaacagggtgatataggccttgcaagtgaaaaactcttctccagaaaaactcaa acaacctttttttcacaacccctgacagtggaatttgtttacagcagactgaaggccctg gcatcagcttctggtgatagggcacagtcaaagaagataaacatacttgttgaggtcctg tcccaggcaaagccactggaggcacgctatataacaaggacggtccttgaggaactgagg gttggtgttgcagagggaatcatacgggacgccattgccagggcctttgaggttgacccg gcactcgttgaaagggcccacatgctcacaaatgacctgggaatggtggccgcagttgca agggaggagggcgagcctggacttggaagactcaaccttgaaccgggaagacccgtgaaa ccaatgctggcacagcttgccagcagcatagaatctgccataacggagcttggaagggcc ttctgtgaaaccaaatatgatggtatacgtgttcagatacacagatgcggcgatgagata tccatcttcaccaggagacttgagaacatcaccgcggcggtccccgagatacttgagggt gttgaggaggcccttccagctgatgactacatagttgagggggaaataatagtcaccatg gatgggaggccagcctccttccagtacatactccagcgtgtcagaagaaaatatgatgtg gagaggcttacaagggaggttcccctctcactattcctctttgatgtcctctaccacaga gaacccctcatcgatgagcccctccggcacagaagggaggtccttgagtcaatactatca gaaatacctgggagggttgaggcgagtcgcatggttgatgtgggcccggataacctggat gatgctctatggctcttcgaggagtcaataagagagggacatgagggtataatgataaag gacaccgaagcgccgtatatacctggtataaggggtaaaaagatgcttaagtttaaggca gaaccagagaccctggacctcattgtggtcggtggcacctatggcaggggtaaaagggca catctggtgggatcctatctcctggctgccagggatgaggacagcggggaccttgttacg gttgcacatgttgcaacggggcttgacgatgagacgctccagcaactctcagagaggatg gaaaaacttgccattgagaggaagggacggaaactctgggtcaggccagagataatactt gaggtcgcctacagtgagatagtgaagagtcctgagtatgaaagcggttactccctgcgt tttccagtggtgaaacgtataagggacgatctgtgcctggacgatgttgatacagttgga cgtatagagtccctcttccagtccggacagccagatcaaccaggtcagtaa

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