Methylomonas sp. LW13: U737_03130
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Entry
U737_03130 CDS
T05879
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U737_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_03130
Enzymes [BR:
metl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U737_03130
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U737_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
RsgA_GTPase
nSTAND3
AAA_22
HHH_2
NTPase_1
HHH
T2SSE
PIF1
AAA_16
AAA_28
AAA
cobW
MobB
AAA_29
MMR_HSR1
PhoH
ATP_bind_1
ABC_tran
NACHT
SLFN-g3_helicase
MeaB
AAA_7
SRP54
AAA_5
TrwB_AAD_bind
TsaE
AAA_18
CbiA
AAA_14
AAA_17
AAA_24
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QBC25993
LinkDB
All DBs
Position
complement(700847..703045)
Genome browser
AA seq
732 aa
AA seq
DB search
MDFQPSPSHSADNPVEKLHGSIERVTFHSEASGFCVLRVKVKGYRELITVIGSAASVTAG
EYIECLGCWVNDRQHGQQFKTISLKIVPPTTLDGIEKYLGSGMVKGIGPHFAKKLVKAFG
ELVFDVIEQTPERLLELPGIGKKRQERVTSAWAEQKVIREIMVFLQSHGVGTSRSVRIYK
TYGDQAIEKVRENPYRLALDIHGIGFKTADTLAQKLGIGPQSLLRAQAGVRHVLQEWSGE
GHCAAIRSNLCEMAAKLLEIPLPIIDQAIAAELTEGNLIAEIDGSDEFIFLTPLHRAEIG
CAVHLNRLNQGDATWGVIDADKAIPWVEGQTGMTLSQSQAAAVRLVLQHKVSVITGGPGV
GKTTLVNSLLKILKAKRVRIGLCAPTGRAAKRLTESTGMEAKTVHRLLEFDPTQFAFKHN
DENPLDLDCLVIDESSMMDVVLMNQLLKAIPTEAAVLIVGDVDQLPSVGPGSVLADIIDS
GQIATVRLTEIFRQASTSKIITNAHRINQGQMPVVDKTESLSDFYCLYAETPEEIFAKLM
QVVLERIPQRFNFHPVNDVQILTPMNRGGLGARSLNIELQARLNGHSEPKITRFGNTYAP
GDKVIQRINNYDKEVFNGDIGFIKAIDLEESQIKILFDDREVDYEFSDLDEITLAYASSV
HKSQGSEYPVVVIPMAMQHFMLLERNLLYTGVTRGKQLVVVIAQPKALAMAVKNQQSQRR
ITHLAARLNEKT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaacccagcccatcacattctgccgacaaccccgttgagaaactacacggc
tccatcgagcgcgtcacgttccatagcgaggcctcgggattttgcgtgttacgggtcaag
gtcaaaggttatcgtgaactgattaccgtgatcggttcggccgctagtgtcacagcgggt
gaatacatcgaatgcctgggttgctgggtcaatgatcgccagcatggtcagcaattcaaa
accatctcgttaaaaattgtgcctccgaccacgttggacggcatcgaaaaatacctgggt
tccggcatggtcaaaggcattggcccccattttgccaaaaagctggtcaaagccttcggt
gagctggtgttcgatgtgattgagcaaacacccgagcgtctgttggaattaccggggatt
ggtaagaaacgccaggagcgtgtgaccagtgcctgggctgaacagaaagtgattcgggag
atcatggtttttctgcaatcccatggcgtcggtacctcgcgttcggtgcgcatttacaaa
acctacggtgatcaggccatcgagaaagtgcgcgaaaatccctatcgcctggcactggat
attcacggcatcggctttaagacggctgacacgctggcccagaagctaggcatcggcccg
caatccctgctgcgagcgcaagcgggtgtccggcatgtcttgcaggaatggtccggcgaa
ggccactgcgctgcgattcgcagcaatctgtgcgaaatggcggcgaagctactggaaatt
ccattgccgattatcgatcaagcgatcgcggcagaattaaccgaaggcaatttgatcgcc
gaaatcgacggcagcgacgaattcatttttctgacgcctttacaccgtgctgaaataggt
tgtgccgtccatctgaaccgattaaatcaaggtgatgcgacatggggtgtgattgacgcg
gataaagccattccttgggttgaagggcaaactggcatgaccttgtcgcagtcgcaagct
gcagcagttcggctggtactccagcataaagtctcggtgatcactggcggccccggtgtc
ggtaaaaccacgctggtcaacagtctgctcaagattctcaaagccaaacgggtgcggatc
ggtttgtgcgcgccgacgggacgtgcggcaaaacgcctgaccgaatcgaccggcatggaa
gcgaaaaccgttcatcgtctactggagttcgatccgactcagtttgccttcaagcataac
gacgaaaacccgctagacctcgattgcttggtgatcgatgagtcgtcgatgatggacgtg
gtgctgatgaatcagttgttaaaagccataccgaccgaagccgcagttttaatcgtcggt
gatgttgaccaattaccttcagtcggccccggatcggtgctggccgacatcattgattcc
gggcaaattgccaccgtgcgtctgaccgagattttccgccaggccagtacatcgaagatc
atcaccaatgcgcaccggattaaccaggggcaaatgcctgtggtggataaaactgaaagc
ctcagcgacttttattgcctctacgccgaaacacctgaggagattttcgctaaattgatg
caagtcgtcctcgaacgtattccgcagcgcttcaactttcatccggtcaacgacgtgcaa
atcctaacgcccatgaatcgaggtggcctgggcgcgcggtcgttgaacatcgaattgcaa
gcccggctcaatggtcacagcgaaccgaagattacccgtttcggtaatacctatgcgccc
ggtgacaaggtgattcagcggatcaacaactacgataaggaagtcttcaatggcgacatt
ggcttcatcaaagccattgatcttgaggaaagccagatcaagatcttattcgacgatcgg
gaggtcgactacgaattcagcgatctggacgaaattacactggcttatgccagcagcgtg
cacaaatcgcaaggctccgaatatcccgtggtggtgattccgatggccatgcagcacttt
atgctgctcgaacgcaatctgctgtataccggcgtcacgcgtggaaaacaattggtcgtg
gtaattgcccagcccaaagcgttagccatggctgtgaaaaatcaacaatcacaacgcagg
atcactcatttggcggctagacttaacgagaaaacgtga
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