Methylomonas sp. LW13: U737_05840
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Entry
U737_05840 CDS
T05879
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U737_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_05840
Enzymes [BR:
metl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U737_05840
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U737_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBC29815
LinkDB
All DBs
Position
complement(1295723..1296418)
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AA seq
231 aa
AA seq
DB search
MEHVVPSTPFAAHEVEPSEQTVSSIIETVNIEFPRHPASSPSSHANDQIWRDLQHEVSLC
EACSLCKTRTQTVFGVGNKQASWMLIGEAPGQNEDLQGEPFVGKAGQLLTEMLRAIGLKR
EEVYIANILKCRPPNNRDPQAEEVAACNRFLQQQIELIQPKIILAVGRIAAQSLLTTQQP
LAKLRGVQHQLHDIPLIVIHHPAYLLRSLLEKAKAWSDLQFALSVYQKLEK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atcgaacacgtagtaccgtctaccccctttgcagcccacgaagttgagccttccgagcaa
acggtatcaagcatcatcgaaaccgttaatatcgaatttccgcgacatcctgcttcgtcg
ccatcatcacacgccaacgatcaaatatggagagacctgcaacacgaggtttctttatgc
gaagcctgctcgctgtgtaaaacccgcacccaaaccgtattcggtgtcggcaataaacaa
gcaagctggatgctgattggtgaggcgcctgggcagaatgaagatttacaaggcgaaccg
ttcgtcggcaaagccggccaattattaaccgaaatgttgcgggcgataggtttaaagcgg
gaagaagtctatatagccaatatattgaaatgccggccgccgaataaccgtgatccgcaa
gccgaagaagtcgccgcctgcaatcgctttctgcagcagcaaatcgaattgatacaaccg
aaaataattttggcggtaggccggattgctgcgcaaagcttgctaaccacccaacaacct
ctggcaaaattacgcggcgttcaacaccaattacacgatattccgctgattgtcattcat
cacccggcttacctattgcgctcgctactggaaaaggcaaaagcctggagcgacttgcag
tttgcgctgtcggtctatcaaaaactagaaaaataa
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