Methylomonas sp. LW13: U737_19425
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Entry
U737_19425 CDS
T05879
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U737_19425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_19425
Enzymes [BR:
metl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U737_19425
DNA repair and recombination proteins [BR:
metl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U737_19425
Prokaryotic type
U737_19425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBC30006
LinkDB
All DBs
Position
complement(4276282..4276833)
Genome browser
AA seq
183 aa
AA seq
DB search
MIRPVVSGKPVLSPVLLIGQAPGDKEGVLGRPFAWTAGKTMFKWFAQIGLDEASFRERVY
MAAVCRCFPGKNPKGGDRVPNPQEIQQCASWLQAEVELLQPKLIIPVGKLAIQQMLPVDK
LSDVIGGLHHLNFHGHDTDVIPLPHPSGASTWHRTEPGAGLLQAALATIQAHAAWLQVLG
RPT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcccggtggtcagcggcaagccggtgctgtcgccggtgttgctaatcggtcag
gcacccggcgataaagaaggggtgttgggcaggccgtttgcctggacggcgggtaagacg
atgttcaaatggtttgcccagatcggcctggacgaagccagttttcgggagcgggtctat
atggcggcggtctgccgctgctttcccggtaaaaatcccaaaggcggcgaccgcgtaccc
aatccgcaggaaatccagcaatgcgcgtcctggctgcaagcggaagtcgagctgttgcag
cccaagttaatcatcccggtcggcaagctggcaattcaacaaatgctaccggtcgataaa
ctcagcgatgtcatcggcggtttgcaccacttgaattttcacggccacgacaccgacgtc
atcccactgccgcacccctccggcgcctccacctggcatcgcaccgagccgggtgccggt
ttgctgcaagcggcgttggcaactattcaggcgcatgcggcctggctgcaagtgttgggg
cgtccaacgtag
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