Methanobacterium sp. BAmetb5: CIT02_05030
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Entry
CIT02_05030 CDS
T05745
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
meto
Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meto03019
]
CIT02_05030 (prf1)
03012 Translation factors [BR:
meto03012
]
CIT02_05030 (prf1)
Messenger RNA biogenesis [BR:
meto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CIT02_05030 (prf1)
Translation factors [BR:
meto03012
]
Eukaryotic type
Release factors
CIT02_05030 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn-ribbon_8
eIF-5_eIF-2B
DpnI
PWP3A-B_C
SIR2
DUF5816
DUF3300
Motif
Other DBs
NCBI-ProteinID:
AXV39716
UniProt:
A0A347AL69
LinkDB
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Position
1054688..1055917
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AA seq
409 aa
AA seq
DB search
MSEPSSTELYEVKRTLKELSDKKGRGTELVSVYIPPDKQISDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRMKLFPKPPERGLVLFVGMIPRGGPGTEKMETYVFEPPEPVQTYI
YHCNSQFFLEPLEEILEDKEIYGLAVIDRKEATIAVMKGKRIDIVKNLTSGVPGKHKAGG
QSQRRFDRLIELAAHEFLKRIGEHMNEAFLNLEGIKGVIIGGPGHTKEDFVNGDYLHHEI
KQMIITTVDTSYTGEFGIREVIDKSMDILTEIDIMREKKLVQRFLTELVDENGLASYGEA
EVRQNLINGAVEVLLLSEDIKSKRYTYQCTSCGNQEQKTIKNEKDAQDQPCKNCGDTMKP
ISSEDVIGDFVKMAEEVGSEVEIISTETEEGMQLLRAFGGIAAILRYRI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccatcatcaaccgaactttatgaggttaaacgcacactgaaagaactctcc
gataaaaaaggtcggggtactgagctggtgtcggtttacataccaccggataagcagatt
agtgatgtggtcaagcacatgcgtgaagagctcagccaaagtgccaatattaaaagtaaa
cagacaaaaaagaatgttcagtctgccattgaagttataatgcagcgtatgaagctcttc
cccaagccaccagaaaggggtctggtgttatttgtgggcatgatcccccggggagggccc
ggaactgagaagatggagacctacgttttcgaaccaccagaacccgtgcagacttacatc
taccactgtaactcccagttcttcctggaacccctggaggagatcctggaagataaggag
atctatggactggcagttatcgaccggaaggaagccaccatagccgtgatgaagggaaaa
cgaatagacattgtcaagaatttgaccagtggtgttcccgggaagcataaagcaggtgga
caatcccagagacgttttgatcgattgattgaactggccgcccacgaattcctgaaaagg
atcggggaacatatgaatgaagccttcttaaatcttgaaggtatcaaaggagtaattatc
ggagggccagggcatactaaggaggattttgtcaacggggattacctgcaccacgagatc
aaacagatgatcatcaccaccgtggacacctcctacaccggtgagtttggtatccgggag
gttattgacaaatccatggatatactcactgaaatcgacatcatgcgggagaaaaagctg
gttcaacgctttttaaccgaactggtggatgaaaatggcctggcatcatacggtgaagcc
gaagtaaggcagaacctgattaacggtgcagtagaagtcctgttactctccgaggatata
aaatctaaaagatacacctaccagtgcacttcctgtggaaaccaggaacaaaaaaccatt
aaaaacgagaaagacgcccaagaccagccctgtaagaattgtggggacaccatgaaaccc
atttcttcagaggatgtaattggagactttgttaaaatggcagaggaagtgggctccgaa
gtggagatcatatccacggaaactgaggagggaatgcaacttctccgcgcctttggaggt
attgccgccatattaaggtacagaatataa
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