Methanobacterium sp. BAmetb5: CIT02_11015
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Entry
CIT02_11015 CDS
T05745
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
meto
Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meto03009
]
CIT02_11015
Ribosome biogenesis [BR:
meto03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CIT02_11015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
RLI
AAA_21
Rad17
Fer4
RsgA_GTPase
AAA
RuvB_N
NB-ARC
Fer4_7
AAA_18
AAA_22
Fer4_21
AAA_24
Fer4_6
Fer4_10
Fer4_2
AAA_16
MMR_HSR1
AAA_29
Fer4_9
DUF359
Sas10
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AXV40804
UniProt:
A0A347APA7
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Position
complement(2235833..2237608)
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AA seq
591 aa
AA seq
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MTRISILDRDRCQPKKCNYVCIEYCPGVRMEEDTITIDPKTKKPIMSEELCSGCGICTNR
CPFNAVSIINLPEALDDPIHRYGQNQFELFGLPTILEGSVVGLLGPNGIGKSTIIRILSG
ELKPNLGNYEEETSWENITNFFKGNQLQSYFQNLSKGNLKVVHKPQMVDLLPKFVKGKVE
GLLNSVDQRNRLEDITQILELESIMGREIANLSGGELQRVAIAAAVLRDADFYYFDEPTS
WLDVRQRLNAVQVIRELAEEGKSILVIEHDLAALDAISDYVHILYGQPGGYGVVSQMRGV
RVGINTYIGGYLREENVRFRKQPIEFQVRPPSTVTDAEVMAEYSDLEKSYEGFHLEVEEG
QVQHDEIITAFGPNGIGKTTFAKILAGVEKPDGGKVKENVKISYKPQYLVSDYSGTVQEF
LYTTVPNYGTNLFKTEIMKPFLLEELLEKKMDELSGGELQRLSVAISLSQEADIYLFDEP
TAFLDVEQRLRAARAIRRVTESRNAAAIIVDHDIVFIDYISSRAMVFTGEAGVEGHATSP
MDLRSAMNRFLSEVGITFRRDKETRRPRVNKQDSYLDREQKEAGEYYYLKS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgactagaatatccatattagaccgtgaccgttgccagcccaagaaatgtaactacgta
tgtattgagtactgccccggggtgcgtatggaagaagacaccatcaccattgaccccaaa
actaaaaaaccgataatgtctgaggaactgtgttcggggtgtggtatctgtaccaaccgt
tgccccttcaatgccgtgagtatcataaatctccccgaagcactggacgaccccatacac
cgttacgggcagaaccagtttgaactgtttggcctgcccaccatcctggaaggatccgtg
gtaggactactgggacccaatggtattggtaaatccaccattatacgcatcctctccggg
gaattgaaacccaatctaggaaattatgaggaagaaacatcctgggagaatataaccaat
tttttcaagggtaaccagttgcagagttacttccagaacctttccaaaggcaacctgaag
gtggtgcacaagccacagatggttgatcttttacccaaattcgtgaagggaaaggtagag
ggattgcttaacagtgtagaccagcgcaaccgcctggaagatatcacccagatcctggaa
ctggaatcaataatgggccgtgaaatagccaacctgagtggtggagaactgcagagggtg
gctattgccgcggcagtgctccgggatgctgatttctattactttgacgagcccaccagc
tggctggatgtacggcagcgtttgaacgctgtgcaggtcatccgtgaactggcagaggaa
ggaaaatccatcctggtaattgaacacgacctggcagccctggatgccatatctgattac
gtgcacattctctacggccaacctggtggttacggtgtagtttcccagatgcggggagta
cgggtaggtataaacacctacattggtggatacttgcgggaggagaatgtccgtttccgg
aagcaacccattgaattccaggtgcggcccccctcaactgtgactgatgccgaggttatg
gccgaatacagtgacctggaaaaatcctacgaggggttccacctggaggtggaagaaggt
caggtgcaacacgatgagatcatcactgccttcggacccaacggtattggtaaaaccacc
tttgccaagatcctggccggagtggagaaacccgatgggggaaaagttaaagaaaacgtt
aaaatatcctacaaaccacagtatctagtttcagattacagtgggacagtgcaggagttt
ttgtacaccaccgtccctaactacggtaccaacctattcaaaaccgagataatgaagccc
ttcctcctggaagaactcttggagaagaagatggatgaactcagtggcggtgaactccag
cgcctctccgtggccatatcattatctcaggaagcagacatatacctctttgacgagccc
accgcattcctggatgtggaacagcgtctccgggcagcccgggcaataagaagggtcact
gaaagccgcaacgctgcggccataatcgtggaccacgatatcgtgttcattgactacata
tccagccgggccatggttttcaccggtgaagcaggggtggaaggacatgccaccagcccc
atggacctgcgttcggccatgaaccggttcctgtccgaggtgggaatcaccttccgccgg
gacaaggaaaccagacgtccacgggtgaacaaacaggacagttacctggaccgggaacaa
aaagaagccggggagtactactacctgaaaagttag
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