Methylibium sp. Pch-M: C1M51_01850
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Entry
C1M51_01850 CDS
T05827
Name
(GenBank) exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metp03400
]
C1M51_01850
Enzymes [BR:
metp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1M51_01850
DNA repair and recombination proteins [BR:
metp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1M51_01850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QAZ38257
UniProt:
A0A4P6GR06
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All DBs
Position
complement(401732..404230)
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AA seq
832 aa
AA seq
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MLLPFAQHLPLARAAWLGLDHAPWMPRFETTQTLLRSLGPPQPAASGELAFDPVADPLQA
AQLLREQVPDWPHRDPRGFALAVARLNDTAQALARARLALPPAQRTAWLEKARALLSGPT
GPGQQERALARLALEWSNTAATLGADALHALRPAAWVALRVGASDPLVESLLAASSVPVL
WLDADLHAPGLRGAPGAVQVSECDDFEDEAQQAAAQVLAHLAQGEQPVALVALDRVLLRR
VRALLERQQVPVSDETGWKLSTTRAGATVMGLLRAVHPRAATDDLLDWLASAPVPADGRA
ALDAAWRRDGITALRQVDEARLEPTALALWQQWLTIGEPLRAGRRLALGEWLSRLREALL
RAGLWELLLDDAAGRQVIDALRCRAEPTAGSAWAQQAARVRFDADGLRDWVDGVLEAVSF
EPPSPSLGGAAPVILTPLARAMLRPFAAVVCPGADAAHLGAPPKPQALLGDALAAALGLP
SSGQRREHERRAFLQLLRVPRLTLLHRRRDGAEPLQASPLLLQLQFDARDAIRSGDEPRT
PLAVMRRPLAHPLPVAPALLPDSLNATAYEALRACPYRFFAQRLLGLAEAEELDDAVDKR
DYGTWLHAVLQDFHRQRQPGAPQDDAALLLTIARARQALLARDDADFLPFAVWFEDLLPR
YLAWWHAEEALGANVIDTELELRAQPPALASTGLRLRGTLDRIDAVPGEAGPGAHRILDY
KTTSETTLRERLRQPLEDTQLPFYAALLDASRGTPPGGVQAAYLSLDGREGVKLLAHPDV
AASAAALLEGIAADFARLQAGAPMPALGEGSACEHCSARGLCRRDHWREDRA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctgccctttgctcagcacctgcccctggcgcgggccgcctggctggggctcgac
cacgccccctggatgccgcgtttcgaaacgacgcagaccctgctgcgttcgctcggtccg
ccgcagccggccgcatcaggcgaactggctttcgatccggtggctgatccgctgcaggcc
gcacaactgctgcgcgagcaggttccggattggccgcatcgcgatccgcgcggcttcgcg
ctcgccgtcgcgcgcctgaacgacacggcacaggcgctggcgcgcgccaggctggcactg
ccgccggcccaacgcacggcctggctcgagaaggcccgtgcgctgctgtccggacccacc
gggccgggccagcaggaacgcgcgctggcccggctcgcgctcgaatggtcgaacacggcg
gccacgttgggcgccgatgcgctccacgccctgaggccggcggcctgggtcgcgttgcgg
gtcggcgcctccgatccgctggtcgagtccctgttggccgcgtcgtcggtcccggtgctg
tggctcgatgccgacctgcacgcccccggccttcgcggcgctcccggtgcggtgcaggtc
agcgagtgcgacgatttcgaggacgaggcgcagcaggcggcggcacaggtgctggctcac
ctggcgcagggcgagcagccggtggccctggtggcgctcgaccgcgtgctgctgcgccgc
gtgcgcgcgctgctcgagcggcagcaggtgccggtgagcgacgagacgggctggaagctg
tcgaccacccgtgcaggcgccacggtgatgggcctgctgcgcgcggtgcatccccgcgca
gcgaccgacgatctgctcgactggctggcctcggcaccggtcccggcggacggccgtgcg
gcgctcgatgccgcgtggcgccgcgacggcatcaccgcgttgcggcaggtcgacgaggcc
cgcctcgagcccaccgcgctcgccctttggcagcagtggctcacgatcggcgaacccttg
cgcgccggccgccgtctggcgctgggcgaatggctgtcgcgtctgcgcgaggcgctgctg
cgcgccgggctgtgggagctcctgctggatgacgccgccggtcggcaggtcatcgacgcc
ttgcgttgccgcgccgagcccacggccggcagcgcctgggcacagcaggcggcacgcgtg
cgcttcgatgccgacggcttgcgcgactgggtcgacggggtgttggaggcggtgtcgttc
gaaccgccgtcgcccagcctcggcggcgcggcaccggtgatcctcacgccgctggcgcgc
gcgatgctgcgtccgttcgcggcggtcgtgtgtccgggggccgatgcggcgcatctcggc
gcgccgccgaagccgcaggccttgctgggcgacgcactggcggccgcgctcggcctgccg
tcgagtggtcagcgtcgcgaacacgagcgacgggccttcttgcagttgctgcgggtgccg
cggctcacgttgctgcaccgccgacgcgacggcgccgagccgctgcaggccagcccgctg
ttgctgcaactgcagttcgacgcgcgcgacgccatcaggtcgggcgatgagccgcggacg
cccctcgccgtgatgcggcgcccgctcgcgcaccccttgccggtcgctccggcgctgttg
cccgactcgctcaacgccacggcctacgaagcgctgcgcgcctgtccctatcgcttcttc
gcgcagcgcctgctgggcctggccgaagccgaggagctcgacgacgccgtcgacaagcgc
gactacggcacctggcttcatgcggtgctgcaggacttccaccgccagcggcagcccggc
gcgccgcaggacgatgcagccttgttgctgaccattgcccgcgcgcggcaggcgctgctg
gcgcgcgacgatgccgatttcctgccgttcgccgtgtggttcgaggacctgctgccgcgc
tacctcgcctggtggcatgccgaagaggcgctgggcgcgaacgtgatcgacaccgagctt
gaactgcgcgcacagccgccggcgctggcgtccacgggcctgcgcctgcgcggcacgctg
gaccgcatcgatgccgtgccgggcgaggccggcccaggtgcgcaccgcatcctcgactac
aagaccaccagcgagaccacgctgcgcgagcgcctgcggcagccgctcgaggacacccag
ctgccgttctacgccgcgctgctggacgcgtcgcgcggcacccccccgggcggggtgcag
gccgcctacctgtcgctcgacgggcgcgagggtgtgaagctgctggcacatcctgacgtg
gccgccagcgctgcggccctgctcgaaggcatcgcggccgactttgcgcgcctgcaggcc
ggcgcgccgatgccggcgctgggcgagggcagcgcctgcgagcactgcagcgcacgcggc
ctgtgccggcgcgaccactggcgcgaggaccgggcatga
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