Methylibium sp. Pch-M: C1M51_10690
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Entry
C1M51_10690 CDS
T05827
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp00550
Peptidoglycan biosynthesis
metp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C1M51_10690 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
metp01002
]
C1M51_10690 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
metp01011
]
C1M51_10690 (dacB)
Enzymes [BR:
metp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C1M51_10690 (dacB)
Peptidases and inhibitors [BR:
metp01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
C1M51_10690 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
metp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C1M51_10690 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QAZ39844
UniProt:
A0A4P6GXP1
LinkDB
All DBs
Position
complement(2238956..2240452)
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AA seq
498 aa
AA seq
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MIRSPNLLWRCVVGMSALVGGTAMAAPNALPPDELPAAVQTALKRAQLPADALVAYIIEL
GPPGPPRGLPRLTHRAQQPVNPASLMKLYTTGAALELLGPAWTWPTPVLTTGQVVDGVLQ
GDLILQGRGDPTLVIERLWLLLREVRQRGIHEVRGDIVLDGSAFVLNGADAGDPADFDGE
RFRPYNVRPDALLLNHKSVTLRFVPEPSRGVARVSTDVNLAGVQIDSAVPMVSGPCGDWR
GSLKPAFDDPGRIRLTGLYPVSCGEKTWPVAYAEPGSYNVRLIAEAWHEVGGQLAGSVRN
GPAPVAAQPLFEATSPPLAAVVRDINKFSNNVMAQQLFLSLGLLPADAAPPLAAGSTAEA
ARERVRALVRARAGCPDGELSIDNGSGLSRQSRSSARCLGAWLQALWASPVMPELMSSLP
LTGIDGTTRRPGRDWGAALGRAHLKTGSLRDAMGLAGYVLGQSGRRYAFVAIVNHPGAGA
ARPVLDALVQWAAEDNGR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaagcccgaatctcctgtggcgctgcgtcgtggggatgtcggccctggtcggc
ggcacggcgatggcagcgccgaacgccctgcccccggacgaactgccggccgccgtgcag
accgcgctgaagcgggcgcagttgcccgccgatgcgctggtcgcctacatcattgagctc
gggccgccgggcccgccccgcgggctgccgcgcctgacgcaccgcgcccaacagccggtc
aacccggcctcgctgatgaagctgtacacgaccggcgcggcgctggaactgctggggccg
gcctggacctggcccacgccggtgctgaccaccggacaggtggtggacggcgtgctgcag
ggcgacctgatcctccagggtcgcggcgacccgacgctggtgatcgaacggctgtggctg
ctgctgcgcgaagtgcgacaacgcggcatccacgaggtccgcggcgacatcgtgctcgac
ggcagtgccttcgtgttgaacggtgccgatgccggcgatccggccgacttcgacggtgag
cgtttccggccctacaacgtgcggcccgatgcgctgctgctgaaccacaagtcggtcacg
ctgcgcttcgttcccgaaccgtcgcgcggcgtggcccgcgtcagcaccgacgtcaacctg
gccggcgtgcagatcgacagcgcggtgcccatggtgtccggcccctgcggcgactggcgt
ggcagcctgaagccggccttcgatgacccgggacgcatccggttgaccggcctctacccc
gtgagctgcggcgagaagacctggcctgtcgcctatgccgagccgggaagctacaacgtg
cggctgatcgccgaggcctggcatgaggttggcggccagctggccggcagcgtgcgcaac
ggccccgcgcccgtcgcggcacagccgctgttcgaggccacgtcacccccactggcggcg
gtggtgcgcgacatcaacaagttcagcaacaacgtgatggcgcagcagctgttcctgagc
ctcggactgctcccggccgacgccgcgcccccgctggccgcgggcagcaccgccgaggcc
gcacgcgaacgcgtgcgcgcgctggtgcgcgcgcgcgccggctgtccggacggtgaactc
tcgatcgacaacggctcgggcctgtcgcgccagtcccgcagcagcgcccgctgcctgggc
gcttggctgcaggcgctgtgggccagcccggtgatgccggagctgatgagttcgctgccg
ctgaccgggatcgacggcacgacgcgccggccaggccgcgactggggcgccgcactcggc
cgcgcccacctgaagaccggttcgctgcgcgatgcgatgggcctggccggctacgtgctc
gggcagtcgggacggcgctacgccttcgtcgccatcgtcaaccaccccggcgccggcgcg
gcgcggccggtgctcgacgcgctggtgcagtgggcggccgaggacaacgggcgctga
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