KEGG   Methyloversatilis sp. RAC08: BSY238_1915Help
Entry
BSY238_1915       CDS       T04449                                 

Definition
(GenBank) ATP dependent DNA ligase domain protein
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
metr  Methyloversatilis sp. RAC08
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:metr00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    BSY238_1915
   03410 Base excision repair
    BSY238_1915
   03420 Nucleotide excision repair
    BSY238_1915
   03430 Mismatch repair
    BSY238_1915
Enzymes [BR:metr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BSY238_1915
    6.5.1.6  DNA ligase (ATP or NAD+)
     BSY238_1915
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BSY238_1915
DNA replication proteins [BR:metr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BSY238_1915
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BSY238_1915
DNA repair and recombination proteins [BR:metr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BSY238_1915
   NER (nucleotide excision repair)
    Other NER factors
     BSY238_1915
   MMR (mismatch exicision repair)
    Other MMR factors
     BSY238_1915
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2025501..2026343
Genome map
AA seq 280 aa AA seqDB search
MLRLRAWLCVALCAVLSMQASQAAPPALMHAQRHHDGIDPAAYWVSEKLDGVRAVWDGRV
LRFRSGRPIAAPAWFTASLPAVPLDGELWIARGRFDVLSGVVRRDVPDDVDWQPVRYLLF
DLPGAPGDFSQRLARLKHIVADAGLPWLQAVPQQRVADRAELASRFAEVVAGGGEGLMLH
RADALWTAGRSDALLKLTPFFDAEAAVTGHVPGKGRHRGRLGALEVVDAEGRRFRIGSGF
SDASRIAPPAIGTQVTYRYRELTARGLPRFPVFVRVRDLP
NT seq 843 nt NT seq  +upstreamnt  +downstreamnt
atgctccgattgcgcgcatggctgtgcgtcgcgctgtgcgcggtgctgtcgatgcaggcc
tcacaggctgcgccgccggcactgatgcacgcgcagcgccatcacgacggcatcgatccg
gccgcctactgggtcagcgaaaagctggacggggtgcgcgcggtgtgggacgggcgggtg
ctgcgctttcgcagcgggcggccgatcgcggcgccggcctggttcaccgcgtcgctgcct
gcggtgccgctggatggcgaactgtggatcgcccgtggccgcttcgatgtgctgtccggt
gtagtgcggcgcgatgtgccggacgatgtcgactggcagccggtgcgctacctgctgttc
gacctgcctggtgcgccgggcgacttcagccagcgcctcgcgcgcctgaagcacatcgtc
gccgacgcgggtctgccctggctgcaggccgtgccgcaacaacgtgtggccgaccgggcc
gaactggcatcacgcttcgctgaggtggtcgccggtggcggcgaaggactgatgctgcat
cgggccgacgcgctgtggacggccgggcgcagcgatgccctgctcaagctcacgcccttt
ttcgatgccgaagcagccgtgaccggccacgtgccgggcaagggccgtcaccgcggccgg
ctcggcgcgctcgaggtggtggatgcagaaggacggcgttttcgcatcggcagcggcttc
agcgacgcgtcgcgcatcgcgccgccggccatcggcacacaggtgacctaccgctatcgc
gaactgaccgcccgcggcctgccgcgcttcccggtgttcgttcgggtgcgcgacctgccg
tag

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