Phytobacter sp. MRY16-398: MRY16398_44680
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Entry
MRY16398_44680 CDS
T05735
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00470
D-Amino acid metabolism
mety00550
Peptidoglycan biosynthesis
mety01100
Metabolic pathways
mety01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MRY16398_44680 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MRY16398_44680 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MRY16398_44680 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
MRY16398_44680 (ddlA)
Enzymes [BR:
mety01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MRY16398_44680 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
Precursor biosynthesis
Amino acid ligase
MRY16398_44680 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_4
PTS_2-RNA
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BBE79412
UniProt:
A0A348DIU5
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All DBs
Position
4647308..4648408
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AA seq
366 aa
AA seq
DB search
MAKLRVGVVFGGKSAEHEVSLQSAKNIVDAMDKSRFDVVLLGIDKQGQWHINDANNYLQN
ASDPARIALNPSESSVALVPGQPSQQLMNATDAKPFPQVDVIFPIVHGTQGEDGTLQGLL
RMANLPFVGSDVLGSAACMDKDVTKRLLRDAGLAIAPFVTLTRSNRDRMTFSEIQAKLGL
PLFVKPANQGSSVGVSKVSNEAQYHAAVSLAFEFDHKVVVETGITGREIECAVLGNDDPQ
ASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAAIAPEVNDHIRAIAVQAYQTLGCAGMAR
VDVFLTPDNKVIINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALARHQADSAL
KSSMNG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactgcgggtaggggtcgtgttcggtggcaagtcggctgaacatgaagtgtcg
ctgcaatcggcaaaaaatatcgtcgatgcaatggataaatcgcgtttcgatgttgtattg
ctggggatcgataagcagggtcagtggcatatcaacgacgcgaataattatctgcaaaat
gccagcgatccggcgcgaattgcacttaatccctctgaaagcagcgttgcgctggtgccg
ggacaaccgtcacagcaactgatgaatgccacggatgccaaacccttcccacaagtggat
gtgattttcccgatcgtccatggtacgcagggtgaagacggtacgctacagggcctgctg
cgcatggcaaacctgccgtttgtcggctcagatgtgctgggctccgccgcctgcatggac
aaagacgtgaccaaacgtctgctccgtgatgcgggtctcgctattgcgccgtttgtcacc
ttaacccgcagcaatcgcgatcgtatgacgttctcagagatacaggcgaaacttgggctg
ccgctgtttgtaaaaccagccaaccagggctcttccgttggcgtcagtaaagtctccaac
gaagcgcagtaccatgccgccgtcagcctggcgttcgaatttgaccataaagtagtggtc
gaaaccggcatcaccggtcgcgagatcgaatgtgcggtgctgggtaatgacgatccgcaa
gccagtacctgtggcgaaattgtgcttaacagtgagttttacgcttacgataccaaatac
attgacgataacggtgcgcaagtggttgtaccggcggcgatcgcccccgaagtgaatgat
catattcgcgccatcgccgtacaggcgtatcagactctgggctgcgcgggtatggcacgc
gtcgacgtattcctgacaccggacaacaaagtgattatcaatgagatcaatacattgcct
ggtttcaccaatatcagcatgtacccgaaactgtggcaggcgagcggtctcggctacacc
gatttgatcacgcgcctgattgaactggctttggcgcgccatcaggccgatagcgcgctg
aaaagttcgatgaacggttaa
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