KEGG   Methanobacterium paludis: MSWAN_0175Help
Entry
MSWAN_0175        CDS       T01509                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mew  Methanobacterium paludis
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mew00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    MSWAN_0175
   03410 Base excision repair
    MSWAN_0175
   03420 Nucleotide excision repair
    MSWAN_0175
   03430 Mismatch repair
    MSWAN_0175
Enzymes [BR:mew01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MSWAN_0175
    6.5.1.6  DNA ligase (ATP or NAD+)
     MSWAN_0175
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MSWAN_0175
DNA replication proteins [BR:mew03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MSWAN_0175
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MSWAN_0175
DNA repair and recombination proteins [BR:mew03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSWAN_0175
   NER (nucleotide excision repair)
    Other NER factors
     MSWAN_0175
   MMR (mismatch exicision repair)
    Other MMR factors
     MSWAN_0175
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
201762..203447
Genome map
AA seq 561 aa AA seqDB search
MNSKINMKYMELVEVYEALDSTTKRLEKTSILAKFFKIMGNEEPELLPIVTLMSLGRIFP
TWSEEELGLGSKLLMKAISLVAGVGPDDVENMTRDAGDIGLAAETLLKRKQQSTLFARQP
LTIEKVHSNLIKITKISGNRAQNKKMEILRELFSSASPKEAKYITRTVLEELRVGVGEGT
IKDAISEAFEVEKTAVERAHMLTNDLGLVAEVAKEEGEEGLGKLTLKPGKPVKPMLAQLS
PGIKISVEEMGWALCETKYDGIRVQIHRLGDDINIFTRRLENISNAVPEIVEYIRKSLPA
CDFIVEGEIIVTRDGKPISFQYILQRVRRKYDIEKMREKVPLKLYLFDVLYYDGPQIDTP
FEERRRILESIVTVTEHKLELSSQVKTTPEEIWKAEDLFTASIKGGHEGIMIKDPHAPYM
PGIRGKKMLKLKAVPETLDLVIVGGTYGKGRRAHVIGSYLLAVRDENNDFKTLAHAATGL
DDNMLIELSRMVEPLIVKKMGRKVEITPSIILEIAYSEIVKSPEYESGYSLRFPVVKRIR
EDIGLDDIDTVERVDSMFKEV
NT seq 1686 nt NT seq  +upstreamnt  +downstreamnt
atgaattcaaaaatcaatatgaaatatatggagcttgtggaagtttatgaagcattggat
tccacaactaaacggcttgagaaaacctcaattttagcgaagttctttaagatcatggga
aacgaagagcctgaacttctcccaattgttactttgatgtcacttggaagaatatttcca
acatggagtgaggaagaactcggattgggttctaaacttcttatgaaagcaatatctctg
gttgctggtgtgggccctgatgatgttgaaaacatgacgagggatgcaggggatataggc
ctggctgcagagacactcctcaaaagaaagcagcagtcaactctttttgcaaggcaacca
ttaaccattgagaaggttcacagcaacttaataaagataacaaagatatcgggaaacaga
gcccaaaataagaagatggaaattttaagggagttattctcatctgcatcacctaaagag
gccaaatacataacaagaacagttttagaagagttaagagttggagtgggtgagggaaca
ataaaagatgccatttcagaggcatttgaagttgaaaaaaccgctgttgagcgggcacac
atgctcacaaacgatctggggcttgttgcagaggtagcaaaggaagaaggtgaggaagga
cttggaaaacttactctgaaacccggaaagcctgttaaacccatgcttgcacagttatca
ccaggtatcaaaatcagcgtagaagaaatgggatgggctctctgtgaaacaaaatatgat
ggtatacgggttcagattcacagattgggagatgatatcaacatattcacccgaagactt
gaaaacatttcaaatgcagtacctgaaatcgttgaatacataagaaaatcgttacctgcc
tgtgacttcattgttgaaggtgaaataattgttacccgagatggaaaaccaatttcattc
cagtacatactccagagggttaggaggaagtatgatattgagaagatgagggagaaggtt
cctctgaaactctatttatttgacgttctttactacgatgggcctcagattgatactccg
tttgaggagaggcgaaggatacttgaatcaattgtaactgttacagaacacaagcttgaa
ctttccagccaggtcaaaacaacacctgaagaaatatggaaggctgaagatctttttaca
gcatccataaaaggtgggcatgagggtataatgataaaggatccacatgcaccatatatg
cctggtatacggggtaaaaaaatgcttaaattaaaggcagtacctgaaactcttgatctt
gttattgttggcggaacctacggcaaagggaggagggctcatgttataggttcttattta
cttgcggttagggatgaaaacaatgatttcaaaactttagcccatgcagcaacaggactg
gatgataacatgttaattgaactttccagaatggttgaaccgcttattgtgaagaagatg
ggtcgaaaggttgaaataactccttcaataattcttgagattgcctacagtgaaatagtg
aaaagtccagaatacgagagcggttactccttgaggttccctgttgtcaagaggataaga
gaagatattggtcttgatgatattgatactgttgaaagggttgactccatgtttaaagaa
gtttaa

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