Martelella endophytica: TM49_05070
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Entry
TM49_05070 CDS
T03801
Name
(GenBank) ATP-dependent DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_05070
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM49_05070
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TM49_05070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJY45205
UniProt:
A0A0D5LML4
LinkDB
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Position
complement(1102576..1106100)
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AA seq
1174 aa
AA seq
DB search
MTDEPTLSAPAEGWLSWTTGRQRLASDPARTVWVSANAGSGKTHVLTQRVVRLLLAGARP
SAILCLTYTKAAASEMSNRVFRRLAEWAVLPEAELTAEIAEIEGARPDALKIAMARRLFA
HALETPGGLKIQTIHAFCESLLHRFPLEANVAGHFSVLDDTAAATLLADARRQLLTATAS
REDPALSDAFQTVLDIADETGLEKLLGEIVAARHAIRPFLTEARRKGGIETALRSAYGFG
EGDDEASIAAEAWPLPGLESLGPLVTIARDDGGSRAAGFADLLQQAVEATDAVARFGLLE
NAFLTASGTPKAESTLVFKSLRIKAPEIGEAVLAAAARIYDIRDRLNRFRIFEKTRAALT
LADRLDARYEALKERRGKLDFEDLIARTATLLTRPDSGQWIHYKLDQGIDHILVDEAQDT
APLQWDVVRALSEDFFSGAGARPGQRTMFAVGDEKQSIYSFQGARPERFAEEGRLTRQRV
TSIEAGFSTISLPLSFRSTASVLSAVDQVFSLPENRKGLSAADEATVHISNRTGHPGMVE
AWEMIAPAEVVDEEDWTAPFDATPEQAPAAILARRIAQRISRMIGNDMLVEGDRERPVEA
GDILVLVRKRDAFVNALTRALKSPYDIPVAGADRLKLADHIAVKDLMALGRFAVLPEDDL
SLAAVFKSPLLDLSEDDLFAVAANRKPFEHVWSALRRLASAGDEKLRDAVEKLERVIAAA
RRRTAFDFYAGILAREGGRRAFLARLGSEAGDILDEFLNAAKDHEDTGLPGLQSFLDVLE
TGGLEVKREQDKGRNEVRIMTVHASKGLEAPVVFLVDSGGRPFVASHLSGFRTMEAGLPV
WHGSKKDGDSAVTADIARREEEAKEEYRRLLYVAMTRAADRLFVTGYRGKTEVPDCWHRL
VWSALSADDTGRCDTVEVMGPGEEQWAGLLWQEKIPPRRFEPASEATSSGKARPPLPMAL
TEAYREAARPAPPLSPSKAGIEVEDPAPLTASPLFAERRTNLALERGRLVHRLLQLLPGF
APEDRDGACRRYLERAGHHLPEDETARIAASVLTVMADPRLASVFAANARAEVSITGTVR
LEGGSYTVSGRLDRLAVDGNRVVLVDFKTNRNPPEDGAPVPFSHAAQMAVYREILNPLYP
EKAIDCVLVYTETAAVRRLDTTELAEALAGLTTK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaaccgacgctctccgccccggcagagggctggctgtcctggaccaccggg
cgccagcgacttgcctcggatcccgcccgcaccgtctgggtttccgccaatgccggctcc
ggcaagacccatgtgctgacccagcgcgtggtgcggctgctgcttgccggcgcgcggccc
tcggcgatcctctgcctcacctataccaaggcggcggcatcggagatgtcgaaccgcgtc
ttccgccggcttgccgaatgggctgtgctgcccgaggccgaactcaccgccgagatcgcg
gagatcgagggcgcgcggccggatgcgctgaagatcgccatggcgcggcggctgttcgcc
catgcactggaaacgcccggcgggctgaagatccagaccattcacgccttctgcgaaagc
ctgctgcaccggtttccgctggaggccaatgtcgccgggcacttctcggtgctcgacgac
accgccgccgccacgcttctggccgatgcccgccggcagcttctgacggcgacggcaagc
cgcgaggatcccgccctttccgatgccttccagaccgtgctggatatcgccgacgagacg
ggtctggaaaaacttctcggtgaaatcgtcgccgcccgccacgccatccgcccgttcctg
accgaggcgcggcgcaagggcgggatcgagacggccttgcgaagcgcctatggtttcggc
gaaggcgacgacgaagcaagcatcgctgcggaggcctggccgctgccggggcttgaaagt
ctcggtccgctcgtcaccatcgcccgcgacgacggcggttcgcgcgcggccggctttgcc
gatcttttgcagcaggccgtcgaagcaacggatgctgtcgcgcgcttcggcttgctggaa
aatgccttcctgacggcttctggaacacccaaggcggagtcgacgctggtgttcaagtcg
ttgaggatcaaggcacccgagatcggtgaggcggtgctggccgccgcagcccgcatctac
gacatccgcgaccggctgaaccgcttccgcatcttcgaaaagacacgtgccgcactgacg
ctcgccgaccggctcgatgcccgttacgaagcgctgaaggaacggcgcggcaagctcgat
ttcgaggatctgatcgcccgcaccgcaacgctgctgacacggccggattccggccagtgg
atccactacaagctcgatcagggcatcgaccacattctcgtcgacgaggcgcaggacacc
gcgccgctgcaatgggacgtggtcagggcgctgagcgaggactttttcagtggtgcgggc
gcaaggcccggccagcgcaccatgtttgccgtcggcgatgaaaagcagtcgatctattcc
ttccagggcgcgcggccggaacgcttcgccgaggagggccggctgacgcgtcagcgtgtt
acctccatcgaggccggtttctcgacaatcagcctgccgctttccttccgctcgacggcc
tcggtgctgtcggccgttgatcaggtgttttccctgccggaaaaccgcaaggggctttcc
gcggcggatgaagcgacggtgcacatctccaaccgcacgggccatccgggcatggtggaa
gcctgggagatgatcgcgccggccgaggtcgtcgacgaggaggactggaccgcgcctttc
gacgcgacgccggaacaggcgcccgccgccatccttgcccggcgcatcgcgcaacgcatt
tcgcggatgatcggcaatgacatgctggtcgagggcgaccgcgaacggccggtggaggcc
ggcgacattctggtgctggtcaggaagcgcgatgccttcgtcaatgctctcacgcgggcg
ctgaaatcaccttacgacattcccgtcgccggcgccgaccggctgaaactggctgaccat
atcgcggtgaaggacctgatggcccttggccgctttgccgtgctgccggaggacgacctg
tcgctggcggcggtgttcaagagcccgctgctcgacctttccgaggacgatctcttcgcc
gttgcggcaaaccgcaagccattcgagcatgtctggtcggcgctccgtcggcttgcttct
gccggtgacgaaaaacttcgcgatgccgtcgaaaagctcgaacgcgtcatcgccgccgcc
cgccgccgcacggcgttcgacttctatgccggcattctggcgcgcgagggcggccggcgg
gcctttctcgcccggctcggcagcgaggccggcgacattctcgatgagttcctgaacgcg
gccaaggaccacgaggacaccggcctgccgggtctccagagtttcctcgacgtgctggaa
accggcgggctggaggtcaagcgcgagcaggacaagggccgcaacgaggtcaggatcatg
accgtgcatgcctccaagggactggaagcgccggtggtgtttctggtcgacagcggcggc
cggccgtttgtcgcaagccatctttccggcttccggacgatggaggcgggcctgccggtc
tggcacggctcgaagaaggacggcgacagcgccgtgaccgccgatatcgcccggcgcgag
gaggaggcgaaggaggaatatcgtcggcttctctacgtggcgatgacgcgcgcggccgat
cgcctgttcgtcaccggctatcgcggcaagaccgaggtgccggattgctggcacaggctg
gtctggagtgcactttcggccgacgatacaggccgttgcgacacagtcgaggtgatggga
ccgggcgaagaacaatgggcggggctcttgtggcaggagaagatcccgccgcgccggttc
gagcctgcaagcgaggccacctcatccggcaaggcccgcccgccgctgccgatggcgttg
acggaggcctaccgcgaggccgctcgtcccgccccgccgctcagcccctccaaggccggc
atcgaggtggaagaccccgctccgctcaccgcctcgccgctctttgccgagcgcaggacc
aatctggcactcgagcgcggccgtctcgtccaccggctgctgcagctcctgccgggcttt
gcaccggaagaccgcgacggcgcctgccggcgctatctcgagcgcgccggccatcatctg
ccggaagacgagacggctcgcatagcggcaagcgtgctcacggtgatggcggacccacgt
cttgcatccgtgttcgcagcgaatgcccgcgccgaggtctcgatcaccggcacggtgcgc
ctcgagggtggcagctacacggtttccggccgtctcgaccgtctggcggtggacggcaac
cgcgtggtgctggtcgatttcaagaccaaccgcaacccgccggaagacggcgcgccggtg
cccttcagccatgccgcccagatggcggtctatcgcgagatcctgaacccgctctatccg
gagaaggcgatcgactgcgttctggtctataccgaaacggcggctgtcagacgccttgac
acgacggaactggccgaggcccttgcgggcctgaccacaaagtga
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