Mariniblastus fucicola: MFFC18_45520
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Entry
MFFC18_45520 CDS
T06181
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mff
Mariniblastus fucicola
Pathway
mff03410
Base excision repair
mff03430
Mismatch repair
mff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MFFC18_45520 (recJ)
03430 Mismatch repair
MFFC18_45520 (recJ)
03440 Homologous recombination
MFFC18_45520 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mff03400
]
MFFC18_45520 (recJ)
DNA repair and recombination proteins [BR:
mff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MFFC18_45520 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MFFC18_45520 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MFFC18_45520 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
QEG24631
UniProt:
A0A5B9PQ85
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All DBs
Position
5773409..5775205
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AA seq
598 aa
AA seq
DB search
MSLKWNLRAHDAQLVQSIERESGVSPVIAQLLALRGITQPEHVSSFLDLKMTGLRKPSEL
PGVDAAVDAIFESIEANERIWVYGDYDADGMTSTAILYRCLKKLGADVGYFVPNRLHDGY
GVSNESLKKIRERDASLVITVDCGINSVKEVEYAKSIGLRMVITDHHRVGNELPNAAAIV
HPGLPGDPYPFPGLCGAGVAFKLAWAMCQRRAGSEKLPESMRNFLFSAVSLAAIGTVCDV
VPLLDENRIIVHHGLKCMQSYANQGLRALIKIAECDKKPKLESEDLGFRIGPRLNAAGRL
GQAQLGVELLTCDSPERAQHLATYINELNKNRDSLDRKILKAANEAIKKHHDPENEPAIV
LAQPDWHLGVIGIAAGRIAEQYHRPTVLISLDPLGQRAGVGSCRSACGVNLYDALAGSAH
HLIKFGGHSAAAGLSIDADKVDAFREEFCEQIIDQVSVEALIPDLDIDAEALLGHLTFSM
MNDLERLAPFGQKNPRPLMCATEVRLAEPPKTMGSDGRHLSLRLQQHGSSIRAVAFGKAE
WAKELEKPDACFDFAFRPQINEFRGYRSVQLHLVDFRPSENGNAVASDVSGDVAIQTQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaaatggaatttgcgtgcgcacgatgcgcaactggttcagtcgattgaacgc
gaatccggcgtgtctccagtcattgcacaactgctcgcgctgcgcggcatcacgcaaccc
gaacacgtcagcagttttctggatctgaaaatgaccggactgcgtaagcccagcgaactt
cccggcgtggacgctgcggtggacgcgatcttcgaatcgatcgaagccaatgaacgaatc
tgggtgtacggcgactacgatgccgacgggatgacctcgactgcgattctatatcgttgc
ttgaaaaagctcggcgcggatgtgggttacttcgtacccaatcggctgcacgatggctac
ggcgtgagcaatgaaagcctcaagaagatccgcgagagggacgccagcctcgtcatcacg
gtcgactgcggaatcaacagtgttaaagaagttgaatacgcaaaatcgattggcttgcgg
atggtcatcaccgaccatcatcgagttggcaatgaacttccgaacgcagcagcgattgtc
catccaggattgccaggcgacccgtatccgtttccgggattgtgcggcgcgggcgtggct
ttcaaactcgcatgggccatgtgtcaacgccgtgccggcagcgaaaagcttcctgaatca
atgcggaactttttgttctctgcggtctcacttgcagcgatcggcacggtctgcgacgtc
gttcccctgttggatgagaatcggatcatcgtgcatcacgggcttaagtgcatgcagtcg
tatgcgaaccagggcttgcgggcgctgatcaagatcgcggaatgtgacaaaaagccaaag
cttgaatccgaagaccttgggttccgtatcggcccaaggctcaacgcggccgggcgtttg
gggcaggctcaactgggagtcgaactgctgacttgcgattcgccagaacgggctcaacat
ttggcaacttacatcaacgagctgaacaagaatcgcgactcgctggatcgcaaaattttg
aaagccgccaacgaagcgatcaagaaacaccacgatccggaaaacgaacccgcaatcgtg
ctggctcaaccagactggcacctgggagtcatcggaatcgcggccggcaggattgctgaa
cagtaccatcgcccaaccgttttgatttcactcgatccgcttgggcaacgcgccggtgta
ggctcctgccgatctgcttgcggcgtcaacctttacgatgctctggctggaagcgcccat
cacttgatcaagttcggaggtcactcagcggctgctggattgagcattgatgccgacaaa
gtggatgcttttcgagaggagttttgcgaacagatcatcgatcaggtgagcgtggaagca
ctgattccggatttggatatcgatgccgaagcactactcggccatttgacgttttcgatg
atgaacgatctggagcgactggctccattcgggcaaaagaatcctcgcccgttgatgtgt
gcgactgaagtccggcttgcagaacctcccaaaacgatgggctccgacggccgacatctt
tcgcttcgtctgcaacaacacggatcatcaattcgggccgtcgcgtttggcaaagccgaa
tgggccaaggaactggaaaagcctgacgcctgttttgatttcgcgtttcgtcctcagatc
aacgagttccgcggctatcgcagcgtccaattgcatctggtcgattttcgtccttcggag
aacggcaatgccgttgccagtgacgtcagtggcgatgttgcgatccaaactcaatga
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