Pseudoduganella flava: GO485_04990
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Entry
GO485_04990 CDS
T06346
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GO485_04990 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_04990 (recC)
Enzymes [BR:
mfla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GO485_04990 (recC)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GO485_04990 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QGZ38472
UniProt:
A0A562Q003
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All DBs
Position
complement(1280527..1283916)
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AA seq
1129 aa
AA seq
DB search
MATGIAPGLLILHGNQLEQLRAAVFQWLRANPLDPLETDILLVQSNGVAEWLKIALAEEG
GVCAATRVALPARFLWEAYRGMLGREHVPRISAFDKGPLTWRLMRLLPGLLRDDAFAPLR
HFLKDGDAERRLQLAERLSDLFDQYQVYRADWLADWAAGRDLLRCPRGIVHALPGGQRWQ
GALWRAVIGSVPAEERALGRAGVHTEFVRAVEAGMQPAAPLPRRVVLFGVSALPYQTLQA
LAALARFTQVIVAVPNPCRYHWGDIIDGRDLLRAARRRHPQRNGVDLAQVPIEALHAHSH
PLLASWGRQGRDYIRMLDEFDEAAGEHAQHLRVDLFSDGDGDTLLRQVQGAVRDLLPLSE
HQFPVPDTTDRSIVFHVAHSVQREVEVLHDQLLALFKHDPTLRPRDVVVMVPDIDVFTAA
IHAVFGQYKGWKQGGDTRFIPFAIGDVNDRSVNPLLVALEWLLRLPQQRCRQSEVRDLLD
VPAVATRFGLAEDDLPTLGLWIEGSGVRWGLDRGHRTGLGLGTAGEQNAWIFGIRRMLLG
YASGDGAAFGDIEPYGEVGGLDAALAGSLAQLVEALLAWRERLAQPRSPAEWGELARALL
AQFFDAREEADRLTLNQLNETLNQWLETCEGAGFDEAVPLSVLREAWLGALDEPSLEHQF
VSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRASRADFDLLALPGMARPGDRSRRDDD
RYLMLEAVLAARDVLYISWCGRNARDNSEQPPSVLVAQLLDYLKAGWYLDLAERTTEHAL
QPFSRRYFEQGGLLTYAGEWRSAHAGAGAHADIDLPPYEVDERFRLKLAGLAAFLRQPVR
YFFQQRLGVRFAESALVGEDEEPFALDALQRYFLEDVLLGDDGAEREEDVRTALTERAQR
LQREGMLPIGLIGDRVRTALVEDVLPARRAWLALRARYPEAAPKLPVGLTLSGIVLEDWI
DQLRTDGTATVWLAQISSKVLDKAGQPRADKLVPAWLRQLAAAAQGMPVTGLLVARDAVV
TMAPLETEAARDVLADLVALWRQGMDGPLPVACKTALALIGGGVPRDAYEHGFDRRGEKD
DLCLYRLWPEYGDLAAEPAFAATAQALYGPLLAWQAECVTVQPIGGGEA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggcatcgcccccggtttattgattttgcacggcaaccagctcgaacagctg
cgcgcggcggtgttccaatggttgcgcgccaatccgctcgacccgctggaaacggatatc
ctgctggtgcagtcgaacggcgtggccgaatggctgaagatcgcgctggccgaggagggc
ggcgtgtgcgccgccacgcgcgtggcgctgccggcgcgcttcctgtgggaggcctaccgc
ggcatgctggggcgcgagcatgtgccgcgcatttccgccttcgacaagggcccgctgacg
tggcgtctgatgcgcctgttgccgggcctgttgcgtgacgatgcgttcgcgccgctgcgc
cacttcctgaaggatggcgatgcggagcgccggctgcagctggccgagcgcctgtccgac
ctgttcgaccagtaccaggtgtaccgcgccgactggctggccgactgggccgccgggcgg
gacctgctgcgttgcccacgcggcatcgtgcacgcgctgcccgggggccagcgttggcag
ggcgcgttgtggcgcgccgtgatcggcagcgttccggccgaggagcgcgcgctgggccgc
gccggcgtgcacacggaattcgtgcgcgccgtcgaagcgggcatgcagccggccgcgccg
ctgccgcgccgcgtggtgctgttcggcgtgtccgcgctgccgtaccagaccttgcaggcg
ctggccgcgctggcccgcttcacgcaggtgatcgtcgccgtgcccaatccctgccgctac
cactggggcgacatcatcgacggccgcgacctgctgcgcgcggcgcggcgccgtcatccg
caacgcaacggcgtcgacctggcccaggtgccgatcgaggcgctgcacgcgcacagccat
ccgctgctggcaagctggggccggcaaggccgcgactacatccgcatgctggacgaattc
gacgaagcggcgggcgaacatgcgcagcacctgcgcgtggacctgttctccgatggcgat
ggcgacacgttgctgcgccaggtgcagggcgcggtgcgcgacctgctgccgctgtccgag
caccagttccccgtgccggataccactgaccgttcgatcgtcttccacgtcgcgcacagc
gtgcagcgcgaagtggaagtgctgcacgaccagctgctggcgctgttcaagcacgacccc
acgctgcgcccgcgcgacgtggtcgtgatggtgcccgacatcgacgtgttcacggccgcg
atccacgccgtgttcggccagtacaagggctggaaacagggcggcgacacgcgtttcatc
ccgttcgcgatcggcgacgtcaacgaccgcagcgtgaacccgctgctggtcgcgctggaa
tggctgctgcggctgccgcagcagcgctgccgccagagcgaggtgcgcgacctgctggac
gtgccggccgtcgccacgcgcttcgggcttgccgaggacgacctgccgacgctcggcctg
tggatcgaaggctccggcgtgcgctggggcctggaccgcggccaccgcaccgggctgggg
ctcggcacggcgggcgagcagaacgcatggatcttcggcatccgccgcatgctgctcggc
tatgcgagcggcgacggcgcggccttcggcgacatcgagccgtatggcgaagtgggcggc
ctggatgcggcgctggccgggtcgctggcgcagctggtcgaagcgctgctggcgtggcgc
gaacggctggcgcagccccgttcgccggcggagtggggcgagctggcgcgcgcgctgctg
gcgcagttcttcgatgcgcgcgaggaggccgaccgcctgacgctcaaccagctgaacgaa
acgttgaaccagtggctggaaacgtgcgaaggcgccggcttcgacgaggcggtgccgttg
tccgtgctgcgcgaagcgtggctgggcgcgctggacgagccgtcgctggagcaccagttc
gtgtccggcggcgtcacgttctgcacgctgatgccgatgcgcgccgtgccgttccgcgtc
gtctgcctgctgggcatgaacgacggcgacttcccgcgccgcgccagccgcgccgacttc
gacctgctggcgctgcccggcatggcgcgcccgggcgaccgctcgcgccgcgacgacgac
cgctacctgatgctggaagccgtgctggccgcgcgcgacgtgctgtacatcagctggtgc
ggccgcaatgcgcgcgacaacagcgaacagccgccgtccgtgctggtggcgcagctgctc
gattacctgaaggccggctggtacctcgacctggccgagcgcaccacggaacacgcgctg
cagccgttctcgcggcgctatttcgagcagggcggcctgctgacgtacgccggcgaatgg
cgctccgcccacgcgggcgccggcgcccacgccgacatcgacctgccgccgtacgaggtg
gacgagcgcttccgcctgaagcttgcgggcctggccgcgttcctgcgccagccggtgcgc
tacttcttccagcagcgcctcggtgtgcgcttcgccgagtcggcgttggtcggcgaggac
gaggaaccgttcgcgctcgatgcgctgcagcgctacttcctggaagacgtgctgctgggc
gacgacggcgccgagcgcgaggaagacgtgcgcaccgcgctgacggaacgggcgcagcgc
ctgcagcgcgaaggcatgctgccgatcggcctgatcggcgaccgcgtgcgcacggcgctc
gtcgaagacgtgctgccggcgcgccgtgcgtggctggcgctgcgcgcacgctacccggag
gcggcgccgaagctgccggtgggcttgacgttgtccggcatcgtgctggaagactggatc
gaccagctgcgcaccgacggcaccgctacggtctggctggcgcagatctcgtcgaaggtg
ctcgacaaggcgggccaaccgcgcgccgacaagctggtgcccgcgtggctgcgtcaactg
gccgccgccgcgcagggcatgccggtgacggggctgctggtggcgcgcgacgccgtcgtc
acgatggcgcctttggagacggaagcggcgcgcgacgtgctggccgacctggtggcgctg
tggcggcagggcatggatggcccgctgccggtggcctgcaagacggcgctcgcgttgatc
ggcggcggcgtgccgcgcgacgcctacgagcatggcttcgaccggcgcggcgaaaaggac
gacctgtgcctgtaccgcttgtggcctgaatacggcgacctggccgccgaaccggcgttt
gccgccactgcccaggccctgtatggcccgctgctggcatggcaggccgagtgcgtgacg
gtgcagccgatcgggggaggggaggcatga
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