Microtus fortis (reed vole): 126490965
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Entry
126490965 CDS
T08493
Name
(RefSeq) collagen alpha-1(XII) chain isoform X1
KO
K08132
collagen type XII alpha
Organism
mfot
Microtus fortis (reed vole)
Pathway
mfot04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126490965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mfot00535
]
126490965
Proteoglycans [BR:
mfot00535
]
Extracellular matrix (ECM) proteoglycans
Others
126490965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
VWA_2
Pur_ac_phosph_N
Collagen
Interfer-bind
DUF4998
VWA_3
CBM_4_9
Copine
Toxin_R_bind_N
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
126490965
NCBI-ProteinID:
XP_049982269
LinkDB
All DBs
Position
Unknown
AA seq
3120 aa
AA seq
DB search
MQTRLPRALAALGVALLLSSIEAEVDPPSDLNFKIIDENTVHMSWERPSDPIVGYRITVD
STTEGPTKEFTLAASTTETLLTDLVPETEYVVTITSYDEVEESVPVIGQLTIQTGDPAKT
GEKKPGKTEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFMAALVSAFDIGEEKTRVG
VVQYSTDTRTEFNLNQYYRRDDLLAAIKKIPYKGGNTMTGDAIDYLVKNTFTESAGSRVG
FPKVAIIITDGKSQDEVDIPARELRSIGVEVFSLGIKAADAKELKQIASTPSLNHIFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVVEPPSNLVATDVSSKYIRLSWDPSPSA
VTGYKILLTPMAAGSRHHALSVGPQTTTLNVRDLSADTEYQISVSAMKGLTSSEPISVME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLAKSFEISPNRVQIS
LVQYSRDPHTEFTLKEFNRVEDIIKAINTFPYRGGSTNTGKAMTYVREKIFVPNKGSRSN
VPKVMILITDGKSSDAFKDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPPETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLRFTQVTSNSFKAEWSPAGENVF
SYHVTYKDVDGDDEVTVVEPSSSTSVVLSNLKPETLYLINVTAEYEDGFSIPLTGEETTA
EVKGAPRNLKVTDETTDSFKITWSQAPGKVLRYRIIYRPVSGGESKEVSTPANQRRKTLE
NLTPDTKYEISVIPEYSSGPGSPLTGNAATEEVRGNPRDLTVSDATTSTLKLSWSGAPGK
VKQYLVTYTPAAGGETQEVTLRGETTNTVLRRLKEGTEYDISVTALYASGAGEALSGKGT
TLEERGSPQDLVTKDITNTSIGAYWTSAPGMVRGYRVSWKSLYDDIEVGEKNLPGDAIHT
MIENLQPETKYRISVFATYSSGEGEPVTKEATTELSQDSKTLKVDEETEHTMRVTWKPAP
GKVVNYRVVYRPQGGGRQMVAKVPPTVTSTVLKRLQPQTTYDITVLPMYKTGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVLGPYDN
TVVLEELRAGTTYRVNVFGMFDGGESLPLVGQEMTTLSDTTVTPFLSSGMECLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEIFEIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQSFKTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEAELKMIATDPDDIHAYNVADFESLSKIVDDLTSNLCNSVK
GPGDLEAPSNLVISERTHRSFRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRLETSTV
LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDIGPTTMHVQWQPVGGA
TGYTVSHQPVRTPEAAKPKEMRVGPTVNDVQLTGLLPNTEYEVTVQAVLHDLTSEPAKAR
EVTLPLPRPQDVKLRDVTHSTMNVIWEPVLGKVRKYIVRYKTPEEEFKEVEMDRSRASTT
LKDLSSQTPYTVSVSAVYDEGESPPATAYETTRRVPAPTNLQFTEVTPESFRGTWDHGAS
DVSLYRITWAPVDSPDKMETILNGDENTLVFENLNPNSLYEVSITAIYPDESESEDLSGT
ERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITHQPSTGEGNEQT
TTVGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS
TLNVRWDHAEGNPRQYKLFYAPTAGGPEEQVPIPGNTNYAILRNLQPDTPYTVTVVPVYT
EGDGGRTSDTGRTLVRGLARNIQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSD
SIVVPGNTRTVHLERLIPDTPYSVDIVALYSDGEGNPSPSQGRTLPRSGPRNLRVFGETT
NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVLLQPLQPDTPYKITVIAV
YEDGDGGHLIGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP
METFVGEVTSYTLHNLNPSTTYDVSVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQVGWD
TFCVKWSPHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPEAEYGVTVFVQTPN
LEGPGVPIKEQTTVKPTEAPTEPPTPSPPPTIPPARDVCKGAKADIVFLTDASWSIGDDN
FNKVVKFIFNTVGAFDEVNPGGIQVSFVQYSDEVKSEFKLNTYNDKAMALGALQNIRYRG
GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAAFVIQQSGFSVFVV
GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS
PGFKMLEAYNLTEKNFASVQGVSLESGSFPSYSAYRLQKNAFINQPTAELHPNGLPPSYT
IILLFRLLPETPSDPFAIWQITDRDYRPQVGVIADPSSKTLSFFNKDTRGEVQTITFDTD
EVKTLFYGSFHKVHIVVTSKSVKIYIDCYEIVEKDIKEAGNITTDGYEILGKLLKGEKKS
ATFQIQSFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAGGP
GAKGPRGERGLNGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPG
LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGTPGSPGATGPSGKPGKPG
DHGRPGQSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMSRFNQMLNQIPNDYHSNR
NQPGPPGPPGPPGDAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGIGSPGSRG
PPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQG
YPEPYVPEGGAYLPDREPFIVPVEPERTAEYEEDYGADEPEREHPDHRRWRRALRPGPGQ
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaggcttccccgagcgctggccgccctgggcgtggccctactcctgtcttcc
attgaggcagaagttgacccaccttccgacttgaattttaaaattatagatgaaaatact
gttcatatgtcatgggagagaccatctgatccaattgtgggttacagaatcacggtggac
tctacaacagaggggcctactaaagagtttacccttgcagctagcaccacagaaactcta
ttaacagaccttgttcctgagacagagtatgtggtgactataacttcctatgatgaagta
gaagaaagtgtgccagttataggtcaactgacaattcaaacaggtgatccagcaaagaca
ggggagaagaaacctgggaaaacagagatacaaaagtgctcggtcagtgcctggactgat
ttagtctttctagtggatggctcctggagtgtgggaagaaataatttcaagtatatttta
gacttcatggctgctcttgtgtctgcttttgacattggggaggagaaaacaagggttggg
gttgttcagtacagcacggataccaggactgaatttaacttaaatcagtattaccgaaga
gatgacctgcttgctgcaattaaaaaaataccatacaaaggcggcaacacaatgacaggg
gatgccattgactacttagttaagaacactttcactgaatctgctggctcaagagtcggc
tttcctaaagtggcaataattatcacggatggcaagtcgcaggatgaggtggatattcca
gcacgggagcttcgcagtattggagttgaggttttctctctgggtattaaagctgcagat
gcaaaagaactcaaacaaattgcatccacaccttccttgaaccacattttcaacgtggcc
aatttcgatgcaattgtggacattcagaatgagatcatctcccaggtgtgttcaggagtg
gatgaacaacttggtgaactggttagtggagaagaagtcgttgagcctccttcaaatcta
gttgccacagacgtgtcatcaaaatacattaggctgagctgggatccatctcccagcgct
gtgacgggctataaaatcctcctgacgccaatggctgcaggaagccgacatcacgccttg
agtgtggggcctcagacgaccacactcaatgttcgcgacctctcagctgacacggaatac
cagatcagtgtttccgccatgaagggactgacatccagtgagccgatttctgtaatggag
aagactcagccaatgaaagttcaagtggaatgttcacgtggtgtggatataaaagccgat
attgtgtttttggtcgatggttcctatagcatcgggatcgcaaactttgttaaagttaga
gcctttttggaagttcttgcgaaaagttttgagatttcaccaaacagggttcagataagc
cttgtccagtacagcagagaccctcacactgagttcacattgaaggaatttaacagagtt
gaagacataatcaaagcaataaacaccttcccctacaggggcggatccacaaacacaggc
aaagcaatgacttatgtcagagagaaaatatttgtgcctaacaaaggctcaagaagtaat
gtaccgaaggtcatgattctcatcactgatgggaagtcatcggatgctttcaaagaccct
gctataaaactcaggaattcggacgtggagatcttcgcagttggcgtaaaggatgctgtt
cgctccgagctggaagccattgcctctcctccccctgagacccatgtgttcacagtggag
gattttgatgccttccagaggatatcgtttgaactcacacagtccatctgtcttagaatt
gagcaagagttggcagctataaagaagaaagcgtatgtgccaccaaaggatctccggttt
actcaggtgacttctaatagtttcaaagctgaatggtctcctgctggagaaaatgttttc
tcatatcacgttacatacaaggatgtcgacggggatgatgaggtcacagtggtggagcca
tcttcaagcaccagtgttgttctcagcaacctgaagccggagaccctgtacttgatcaat
gtgacagcggagtatgaggatggcttcagtattcccctgactggagaggagaccacagct
gaagtaaaaggagcaccacgaaacctgaaggtgacagatgagactacggacagttttaaa
attacctggtctcaagctccagggaaagtcttaaggtatcgaattatatacagaccagta
tctggtggagaaagcaaagaagtcagtaccccagccaatcagaggaggaaaacactggag
aacctgacgccagacacaaagtatgaaatatctgtcattcctgaatattcctccggacct
ggctctccactgacaggaaatgcagccaccgaagaagttagagggaatccaagagactta
acagtttctgacgctacaacatcaactctgaagctgtcttggagtggggcaccaggaaaa
gtgaagcagtatcttgtcacatacaccccagcagcaggaggtgaaacccaagaggtcact
ttgaggggagagacaaccaacacagtgttgaggcgactgaaggaagggacagaatacgac
atatctgtgacagccttgtatgcgtctggagctggagaagccctttctggtaaaggaaca
acccttgaagaacgtggttcacctcaagatctagttactaaggacatcacgaacacgtcg
attggggcctattggacatctgctccaggaatggttcgagggtacagagtctcatggaag
tcgctttatgatgacattgaggttggagagaaaaatcttcctggagatgcgattcatact
atgatagagaatctacagccagagaccaagtacagaatttcagtttttgcaacttacagc
agcggagaaggagaacctgtgactaaagaggccacaactgaattatcccaagattccaaa
accttaaaagtggatgaagaaacagaacacacgatgagagttacgtggaaaccagcacca
gggaaagttgtcaactaccgtgttgtgtatcgccctcaagggggagggagacaaatggtc
gctaaggtgccacccacagtcacttcaacagtgctaaagagacttcaacctcagaccaca
tacgacatcacagttctcccgatgtataagacaggagaagggaagcttaggcaaggatca
gggacaacagcttctcggtttaaatcaccaaggaacctcaaaacttctgacccgacaatg
tcaagtttccgcgtgacttgggagcctgcccctggggaagtgaaaggttacaaagtcaca
ttccaccccacaggagacgacagaagactaggggagttggtccttggaccatatgacaac
acagttgtcttggaggagcttagggcaggcaccacctatagagtcaatgtctttgggatg
tttgatggaggagaaagtttaccccttgttgggcaagagatgacaaccctttctgataca
accgtgacgccatttttatcctccgggatggagtgtctcaccagagcggaagcagacatt
gtcttgctggtggatgggtcatggagtatcggccgcgcaaattttagaaccgtgagaagc
ttcatttctcgtatcgtggaaatctttgaaattggtcccaagcgagtccaaattgctctc
gctcagtacagtggagaccccagaacagagtggcagttaaatgcccacagagacaagaag
agtttattacaggctgtggcgaacttaccgtacaaaggaggaaacaccctcacgggcatg
gctttgaatttcattcgccaacagagcttcaagacccaagctggcatgaggcctcgcgct
cgcaaaattggagttctcattaccgacgggaaatcacaagacgacgtggaggctccatca
aagaaactcaaggatgaaggagtagaactgtttgctattggtattaagaacgctgatgaa
gctgagctaaagatgatcgccacggatccagatgacatccatgcatacaatgtggcggat
tttgagtcattatccaagattgtggacgacctcaccagcaacttgtgtaacagcgtcaag
ggccctggtgacttggaagcaccatctaacttagttatttctgagaggactcaccgttcc
tttagagtgagctggacacctccttctgacagtgtggacagatacaaggtggaatattac
cctgtttctggagggaaacgccaggagttttatgtgagtcgactggaaaccagcacagtg
ctgaaagacctgaagcctgagactgaatatgtggtgaacgtgtactctgtggttgaggat
gaatacagcgagcctctgaagggcacagagaaaaccctgccagttcctgtagttagcctg
aatatttatgacattggccccaccaccatgcatgtgcaatggcagcctgtgggaggagct
actggctatacggtgtcacaccaaccagttagaacccctgaagcagcaaaacccaaagag
atgcgtgtgggtccaacagtgaacgatgtacagctgactggcctccttcctaacactgaa
tatgaggtcacggttcaagctgtcctgcatgacctcactagtgaacctgccaaagctcgg
gaagtcacattacccttacccagacctcaagatgtgaaactcagagatgtgactcatagc
accatgaatgtcatctgggaacctgtgcttgggaaagttcgtaaatacattgttagatac
aaaactccagaagaggagttcaaggaggtggaaatggatagatcaagggccagcactacc
ctcaaagacctctcctctcaaaccccatacacagtgagcgtttctgccgtgtatgatgag
ggcgaatctcccccagcgacggcttatgagacaacccggcgtgttccagcaccaacaaac
ctccagtttaccgaagtgacaccagagagtttcaggggtacttgggaccatggagcttca
gatgtgtctctgtacagaattacctgggcacctgttgacagtccagataagatggagacc
atcttaaatggagatgaaaataccttggtgtttgaaaatctgaaccccaactctctgtat
gaagtttccattactgccatctaccccgatgagtctgaaagcgaggacctgagtggcacc
gagcgcacactgcgtttgatacctttaacaacacaagctccaaaaagtggtccccggaac
cttcaggtgtacaacgccacatctaacagtctgactgttaagtgggatcctgctagtggc
cgtgttcagaaatacaggatcacgcatcagccttccacaggagaaggcaatgaacaaacg
actacagtaggaggacggcagaacagtgtggtcctgcagaaactgaagcctgacactccc
tacaccatcactgtgtcctccctatatcctgatggtgaaggcggccggatgactggaagg
ggcaagacaaaacctctgaatactgtgaggaacttgagagtgtatgacccttctaccagc
actttgaatgttcgctgggaccatgcagagggcaatcctcgccagtacaagctcttctat
gccccaacagcaggtggtccagaggaacaggtaccaatccctgggaataccaactatgcc
attcttaggaacctgcagccagatactccatacactgtcacagtggttcctgtctataca
gaaggtgatggaggacgcacgtcggacactggaaggacgttggtgagaggcctggcaaga
aatatccaagtgtataaccctacgcccaacagccttgatgtccgctgggaccctgctcca
ggaccagtacagcagtaccgcattgtatactcccctgttgctggcacaagaccctcggat
tccattgtggtgccagggaatacccgcacggtacatctggagaggctgattcctgacaca
ccctattccgtggacatcgtggctctctactcagacggagaggggaatcccagccccagc
cagggccgaacacttccacgaagtggtccaaggaatctacgggtctttggagagacgacc
aacagcctctccgtagcctgggaccatgctgatgggccagttcagcaatacaggatcatc
tattctcctaccgttggtgatccaatcgatgaatataccacagtcccaggcagaagaaac
aatgtattactgcagcccctgcaacctgacactccgtataaaattactgtcattgctgtt
tatgaggatggggatggtggccatctaatcggaaatggaaggactgtgggattgcttcct
ccgcagaacatacacatctctgatgaatggtacaccaggttcagagtgtcctgggaccct
tcaccctcaccagttcttggatataaaattgtgtacaaaccagttgggtccaatgagccc
atggaaacctttgttggagaagtgacatcatacacattacacaacctcaatcccagcact
acctatgacgtcagtgtttatgctcagtatgactctggactcagcgttcccctcacagat
caaggcaccacattgtacttaaacgtgacagatctgaaaacttaccaggttggatgggat
acgttctgtgtcaaatggtcaccccatcgggcagctacttcctacaggctgaaactgagc
cctgcagatggaaccagaggacaagaaattacagtacgaggatcggaaaccagtcactgc
ttcactggcctctccccagaggcggagtatggcgtcaccgtattcgtgcagacaccgaac
ctggaggggccgggagtccccatcaaagaacagaccactgtaaaaccaacagaggctcct
acggaaccgcccacgccttctcctcctcccactattccacctgcccgtgatgtatgcaaa
ggggctaaggcagatattgtgttcttgacggatgcctcttggagtattggagatgacaat
tttaacaaagttgtaaaatttatctttaatactgtgggggcctttgatgaagtcaaccct
ggtgggattcaggtttcctttgtgcagtacagtgatgaggtcaagtccgagttcaagctg
aacacatacaacgataaggctatggcccttggagccctccagaacattcggtacagagga
ggaaacacaagaacaggcaaggccctcacgttcatcaaggagaaagtcttgacctgggag
agcggcatgaggaagaacgtcccaaaggtgctagttgtggttacagacggccggtcccag
gatgaggtgaagaaggcagcgtttgtcatccagcagtcaggattcagtgtgttcgttgtt
ggtgtggctgatgtggactacaatgaactcgccaatattgccagcaagcccagtgaaagg
catgtgttcattgtggatgacttcgaatctttcgagaagatcgaggacaatctcatcacc
tttgtttgcgaaactgccacttcaagttgtcctctcatctatctggatggctacacctca
ccaggctttaagatgcttgaagcttacaacctgacagagaagaattttgcttctgtccaa
ggggtgtctttggaatcagggtctttccccagctattccgcctacaggcttcagaagaat
gcctttatcaaccagccaacagcagaactccatccaaacggactccctccttcatacacg
atcatattattgtttagacttctcccagaaactcccagtgacccctttgcaatttggcaa
atcacagacagagactacagaccacaagttggagttattgctgatccttctagcaagaca
ctatctttctttaacaaggatacaagaggagaggtgcaaacaattacatttgacacagac
gaagtgaagacattattttatggaagttttcataaggtccatattgtagtgacctcaaaa
agtgttaagatttacattgactgctatgaaattgtagaaaaagatatcaaggaagctgga
aatatcacaactgatggctatgaaattcttggaaaacttcttaaaggggagaagaagtca
gccacattccaaatccagagctttgacattgtctgcagcccagtgtggaccagcagagac
agatgctgtgatattccctctcggagagatgaagcaaaatgccctgctcttccgaatgct
tgcacgtgtacacaggacagcgttggacctccaggccctccaggccccgcaggaggacct
ggtgcgaaaggtcccagaggtgaaaggggcctcaacggagcagttgggcctccaggtccc
cgtggagatacaggtcccccaggccctcagggtcctccaggcccccagggacccaatgga
ctctccattccaggagaacagggtcgccagggaatgaaaggtgacgcaggagagccaggg
cttcccggccggactggaaccccaggattacctggcccaccaggaccaatgggaccgcca
ggagacagagggttcactggaaaggatggtgccatgggaccgagaggcccgcccgggcca
ccgggaacccctggttctccaggagctacagggccaagtggaaaaccagggaaacctgga
gaccatggcagaccaggccaatctgggttaaaaggagaaaaaggtgacaggggagacatt
gcttcccagaacatgatgagagcagttgcaagacaagtctgcgaacaactaataagtggc
cagatgagcagattcaatcagatgctgaatcagattccaaatgattaccactcaaatcgc
aaccagcctggcccaccagggcccccagggccccctggtgatgctggagccagaggagaa
ccagggcctggggggcgaccaggattccctggcacaccggggatgcagggaccccctggt
gaacgaggtttgcctggagagaaaggtgaaaggggtatcgggtctccaggatcccgcggg
ccgcctggaccgccaggtccacaaggagaatccagaacgggtccaccagggtctacaggc
tcaagaggccctcctggtccccctggccgtcccggaaactcaggtatccgaggaccccca
ggtcctcctgggtattgtgattcatcgcagtgtgccagcatcccatacaatgggcaaggc
tatccagagccttatgtgcccgagggtggggcctacctgcctgatcgtgagcccttcatc
gtgcctgtggagccggagaggacagcagaatatgaggaggactacggtgcagacgagcct
gaacgggagcaccctgaccacaggcgttggcggcgcgccctgcgcccaggccctgggcag
tga
DBGET
integrated database retrieval system
