Microtus fortis (reed vole): 126500545
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Entry
126500545 CDS
T08493
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mfot
Microtus fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126500545
03036 Chromosome and associated proteins [BR:
mfot03036
]
126500545
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126500545
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126500545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
DUF4718
Motif
Other DBs
NCBI-GeneID:
126500545
NCBI-ProteinID:
XP_049996480
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MEEKKKKKQEDKKKKEGAQKKAADQKTKVPELTKSCSSQPQPAGTSTSTSTSTISSSNNG
KRASACGQQTAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLASVSPAQAAGPSGASP
PPLPGAGTQLHPSKLQPDLGHSGLAEHYENSHWGQQPTYRSEANCSWDKVTIDRTDQEVW
PSIPVTETESASECPTDTDSASNCGSENSSMATGSAQGSFTGHPKKTNGNNGTNGALVQS
SSNQSALGAGGTNGNGGVARVWGVATGSSSGLTHCSVGGGDGKMDNMIGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNMGSQNGNPVGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGLGAIIPPHLQGLPGANGSSVSQGSGSGGEGMGSSVWGLSPGNPATGNNSSGFNQGNG
DTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPTGPGILAWGRGSGNNGIGNIHSGAWGH
PSRSSSNGVNGEWGKPPNQHSSSDINGKGSTGWDSPSAASQTPALQPGSEHMSSWAKATS
SGTTASEGSSDGSGSHNEGSTGREGTGESRRRDKGVLDQGHIQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGNAATQPSNSGGKSDGSIMNSTNTSSVSGWV
SSPPAAVPANTSWGDSNNKAPSGPGVWGDSISSTAVNNAAATKSGHAWSGTVNQEDKSPS
WGEPQKPKSQNWGDGQRANPAWSAGAGDWADSSSVLGHLGDGKKNGSGWDADGNRSGSGW
NDATRSGTSGWGSGTNAKVNPGTNWGESLKPGPQQNWAHKPQDNNVSNWGGAASVKQTGT
GWIGGPLPVKQKDSCEATGWEEPSPPSIRRKMEIDDGTSAWGDPSTYNNKTVNMWDRNNP
VIQSSTTTPVTPTTPTSSSTTHQTETPPSHQAGTQLNRSPLLGPVSSGWGEMPSVHSKAE
NSWGEPSSPSPLVDNGTAAWGKPPSSGSGWDHPAEPVVPFGRANAPAAAPALCKPASKSM
QEGWGSGGDEMNLGTSQWEDEDGDMWNNASQESSSSCSSWGNASKKGLQKGMKTPGKQDE
AWIMSRLIKQLTDMGFPREPAEEALKSNSMNLDQAMTLLSICCTPGALLEKKVDMDKRAL
GMTDYNGMVTKPLGCRPPISKESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSL
KLPLSNSALPSQALGGIASGLGMQNLNSSRQIPSGNLGVFGNSGAAQARTMQQPPVQPLN
SSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLSPALLTSPINPQHMTMLNQLYQLQLAYQ
RLQIQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKQPPPPPPPP
HLSLHPSAGKSAMDSFPPHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNSIDMS
SGLSVKDSSQSQSRLPQWTHPNSMGNLSSAASPLDQNPSKHGAIPGGLSIGPPGKSSIDD
SYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSISWPPEFHPGVPWKGLQNID
PENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGKLSDIKSTWSSGPASHTQASLSHELW
KVPRNTTAPTRPPPGLANPKPSSTWGTSPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLT
PQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAE
FAGEEEVNRFLAQGQALPPTSSWQSSSGGSQPRLGSSGSTHGLVRSDAAHWNTPCLSGKG
SSELLWGGVPQYSSSLWGPPSADDARVIGSPTPLNTLLPGDLLSGESI
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagacaagaaaaagaaggaaggtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacttactaagagctgttcaagccagccc
caacctgccggtaccagtaccagtacttccaccagcactatttctagcagcaacaatggc
aaacgtgcatctgcctgtggccagcagacagctgcatcccgctacctgcctcgggaggtg
cctccacgctttcgccagcaagaacagaagcagctgttaaagagaggccagccattgcct
acagggactctggccagtgtgagcccagcacaggctgctggaccttcaggagcaagccct
cctcccctccctggagctggaacacagctgcatcccagcaaactccaaccagatcttggt
catagtggattggcagagcattatgaaaattcccactggggacagcagcccacgtacaga
agtgaagccaactgcagctgggataaagtgacaatagacaggactgaccaggaggtgtgg
ccgtccatcccagtaacggagactgaatctgcctcagaatgtcctacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagcgcccagggcagcttc
acaggacatcccaagaagacaaatggcaataatggcaccaatggtgcactcgtccaaagc
tcttctaatcagagtgcccttggggcaggtggaaccaacgggaatggaggtgtggccaga
gtgtggggtgtagccacaggctccagctctggcctgactcactgctctgttggtggtgga
gatggaaaaatggacaacatgattggagatgggagaagtcaaaattgttggggtgcttcc
aactccaatgcgggcattaatctcaaccttaatcctaatgccaacccagctgcctggcct
gtactcgggcatgaaggaactgtggcaacaggcaacccttccagtatttgcagtccagtc
agtgccataggtcagaatatgggcagccagaatgggaacccagtgggcaccctaggtgcc
tggggaaacttgctgccccaagagagcacagaaccacagacgtccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcaccaaaccctatcaatgcaatgcagacaaacggactgccaaactggggcatg
gctgttggtctgggcgccatcatcccgccccatttgcaaggccttcctggtgctaacgga
tcatcggtctctcaaggcagtggaagtggtggggaaggaatgggcagttctgtgtgggga
ctgtcccctggtaatcctgccacaggaaataacagttctgggttcaatcaggggaatgga
gacactgtgaactcagcattaagtgctaaacagaatggatccagcagtgctgtgcaaaag
gaagggaatggagggaatgcctgggactcgggacctcctacaggtcctggtatccttgcc
tggggaaggggcagtggcaacaatggcattggtaatatccattcaggagcttggggccac
cccagccgaagctcttctaatggtgtgaatggggagtgggggaagcccccaaaccagcat
tccagtagtgacatcaacgggaaaggatcaacagggtgggatagtcccagtgctgccagc
cagacacctgccttgcagcctggcagtgaacacatgagctcatgggccaaagctacatct
tctggaactacagcaagtgaaggaagtagcgatgggtctggcagtcacaatgaaggaagc
actgggagggaaggaacgggagagagcaggaggcgagacaagggggttctagaccaaggg
cacatccagttgccaaggaacgatcttgacccaagagttctgtctaatactggatgggga
cagactcctgtaaagcaaaacactgcctgggaatttgaagagtcccctaggtctgaaagg
aaaaatgacaatgggacagaggcctggggtaatgcagctactcagccttcaaactcaggg
gggaagagtgatgggtccatcatgaacagtacaaatacctcttcagtatcggggtgggtc
agctcaccacctgccgccgtgccagcaaacacgagctggggagacagcaacaacaaagcg
ccaagtggcccaggagtttggggggactcgataagctctactgctgttaacaatgctgct
gccaccaagagtggccatgcttggagtgggaccgtaaaccaagaggacaagtcaccctcc
tggggtgagcctcagaaacccaaatcccaaaactggggagatggacaaagagcaaaccca
gcctggagtgcaggagcaggcgactgggcagattcatcatctgttcttggacatctaggg
gatgggaagaaaaatggatctggatgggatgctgatggtaataggtcaggatctggttgg
aatgatgccacaagatctgggaccagtggctggggcagtggcacaaacgctaaggtgaat
cctggtacaaattggggggagtctctcaagcctggtccccagcagaactgggctcacaaa
ccccaagacaacaatgtgagtaactggggaggagctgcttctgttaagcagacagggaca
gggtggattggggggccactgccagtcaagcagaaggacagctgtgaggcaactggctgg
gaggagccttccccaccatccatccgacgcaaaatggaaattgatgatggtacctcagct
tggggggacccaagcacctacaacaataaaactgtaaacatgtgggacagaaacaatcca
gtcatccagagcagtaccacaacccctgtcacccccacgacccccacttcgagcagcacc
acacaccaaaccgagacgccgccttcacaccaggctggcactcagctgaatcggtcacca
ctgcttgggccagtttcatctggctggggagaaatgcccagtgtgcactccaaggctgag
aactcatggggagagccgtcctccccatctcccctggtcgacaatggcacagcagcgtgg
gggaagcctcctagcagtggcagtggatgggatcatcctgctgagccagtggtgccattt
ggaagagccaatgctcctgctgctgccccagccctgtgcaaaccagcttccaaatctatg
caagaaggctggggcagtggtggggacgaaatgaacctgggcaccagccagtgggaggat
gaggatggggacatgtggaataacgcctctcaagaaagcagctcatcctgcagctcctgg
ggcaatgcctcgaaaaaaggacttcagaagggcatgaagacacctggcaagcaggatgag
gcctggatcatgagccgactgatcaaacaactcacagacatgggcttcccgagagagcca
gctgaagaggccttgaagagcaacagtatgaaccttgaccaggccatgacgttgctctct
atatgttgtaccccaggcgctctgctggaaaagaaggtggatatggacaaacgtgcactg
ggaatgaccgactacaatggaatggtcaccaaacccctcggctgccgcccaccaatctcc
aaagagtcttccatggaccgccccaccttccttgacaagctcaccctttctttctccaat
caggatggcggcctcgtggaagagcccacgacttcaccatttttgccttccccaagcctg
aagctccccctttccaacagtgcactccccagtcaggccctgggtgggattgcctcaggg
ctgggcatgcaaaacttgaactcttctagacagatcccgagtggcaatctgggtgtgttt
ggcaatagcggagcagcacaagccaggaccatgcagcagccgccagtgcagcctcttaat
tcctcccagcccagcctccgtgctcaagtgcctcagtttctatcccctcaggttcaagca
cagcttttgcagtttgcagcaaaaaacattggtctcagccctgcactattaacctcgcca
attaaccctcagcatatgacgatgttgaaccagctctatcagctgcagctggcataccaa
cgtttacaaatccagcagcagatgttacaggcccagcggaatgtttccggacccatgaga
cagcaggagcagcaagttgcgcgcacaatcactaatctgcagcagcagatccagcagcac
cagcgccagctggcccaggccctgcttgtaaagcagcctccaccaccaccacccccgcca
cacctgtctctgcacccttctgcaggcaaatcggccatggatagcttcccccctcacccc
cagactcccggccttcccgacctgcagaccaaagagcagcagtcttcacccaacaccttt
gctccttatcctcttgctggattgaacccaaacatgaatgtcaacagtatagacatgagc
agtggtttgtctgtgaaggactcatctcagtcccagtcacgcctccctcagtggacacat
cccaactccatgggtaacttgtctagtgctgcttctcccctggaccagaaccctagcaag
catggtgctatccctggaggtctaagcattgggcctccaggtaagtcctccattgatgac
tcctatggccggtacgatttaatccagaacagtgagtcaccagccagtcctcccgtagct
gttccccatagctggtcacgtgccaaatctgacagtgataaaatctcaaatggctccagc
atcagctggcccccagaatttcatcccggagttccatggaaaggacttcagaatattgat
cccgagaatgaccctgatgtcactcctggcagtgtccctactggacccaccatcaacacc
actatccaggatgtgaatcgctacctcctcaagagtggaggtaaactgtcagacattaaa
tcaacgtggtcctcgggcccagcctctcacacacaagcctctctgtctcatgagttgtgg
aaggtacccagaaacactactgcacccaccaggccacctccaggcttagccaatcccaag
ccttcctctacgtggggcaccagccccctaggctggaccagctcctactcctcgggttct
gcttggagtactgacacctcaggaagaacaagcagctggctcgttctgcgcaacctcaca
ccccagattgacggttctacactgcggacgctgtgtttgcagcatgggcctctcatcaca
ttccacctgaatctgacccaaggcaatgctgtggtccgttacagctccaaggaagaagcc
gccaaggcccaaaagtctctgcacatgtgtgtactgggaaacaccaccatcttggctgag
tttgctggtgaagaagaagtgaaccggttcctggcccaaggccaagccctcccacccacc
tccagctggcaatctagcagcgggggcagccagcccaggctgggctcctcgggcagcacc
catggcctagtgcgcagcgacgctgcccactggaacaccccgtgcctgagcggcaaaggc
agcagtgaactgctgtggggtggggtgccccagtactccagcagtctctggggccctccc
agtgctgatgatgccagggtgattggcagccccacacctctcaacactttgctgcctggg
gacctgctcagcggcgagtccatctag
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integrated database retrieval system
