KEGG   Mycobacterium fortuitum: XA26_13320Help
Entry
XA26_13320        CDS       T04105                                 

Gene name
ligD
Definition
(GenBank) LigD
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mft  Mycobacterium fortuitum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mft00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    XA26_13320 (ligD)
Enzymes [BR:mft01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     XA26_13320 (ligD)
DNA repair and recombination proteins [BR:mft03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     XA26_13320 (ligD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1374827..1377103
Genome map
AA seq 758 aa AA seqDB search
MERYERVRLTNPDKVLYPASSTTKAEVFDYYLSIAEVMLPHIAGRPVTRKRWPNGVAEAS
FFEKQLASSAPDWLERGTIVHKSGTTTYPIVNTREGLAWIAQQASLELHVPQWRFSSDGS
QGPATRIVFDLDPGEGVTMPQLCEVAQAVRELMSDIGLMTYPLTSGSKGLHLYVPLADPI
SSRGASVLAKRVAVQLEQAMPKLVTATMTRSLRAQKVFLDWSQNNAAKTTIAPYSLRGRD
YPTVAAPRTWDEIGDPDLRHLRFDEVLQRISDDGDLLAGLDDDAPVADKLTTYRSMRDAT
KTPEPVPRDIPVRGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDTTAVNHLA
VHTEDHPIEYLTFHGTIPKGEYGAGNMVIWDTGTYEAEKFRVPADPDDSDAPKGEVIFTL
NGNRIDGRYALIQTEGKNWLAHRMKDQSSAAPEPKDFAPMLATEGSVAKLKATQWAFEGK
WDGYRLLVEAEHGRLQLRSRRGRDVTAEYPQFEALAADLADHHVVLDGEAVALDDHGMPS
FREMQNRARSTRVEFWAFDILWLDGRSLLRAKYTDRRKLLEALAAGGGLIVPEQLAGDGP
EAMEHAREHKFEGVVAKKRDSTYQPGRRSASWIKDKIWNTQEVVIGGWRQGEGGRSSGIG
ALVLGVPGPHGLQFAGRVGTGFTEKELTKLKGMLKPLHTKESPFDKPLPKLDAKGVTFVR
PELVGEVRYSERTTDHRLRQPSWRGLRPDKAPDEVVWE
NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt
atggagcggtatgaacgggttcggctgacgaaccccgacaaggtgctctaccccgcatcg
agcaccaccaaggccgaggtgttcgactactacctcagcatcgccgaggtgatgctgcct
cacatcgcgggccgcccggtgacccgaaagcgctggccgaacggggttgcggaggcgtcg
ttcttcgaaaagcagctggcgtcgtcggccccggactggcttgagcgcggcaccatcgtg
cacaagtccggcaccaccacgtacccgatcgtcaacacccgcgagggcctggcctggatc
gcgcagcaggcctcgctggaactgcatgtgccgcaatggcgattctcatctgacggcagt
caaggcccggccacccgcatcgtgttcgacctcgatccgggcgaaggcgtcaccatgccc
cagctgtgcgaggtcgcccaggctgtgcgtgaactgatgagcgatatcggcctgatgacc
tacccgctcaccagcggcagcaaggggctgcacctgtatgttccactggccgatccgatc
agctcccgcggcgcctcggtgctggccaagcgggtcgccgtgcaactcgaacaggcgatg
cccaaactcgtcaccgccaccatgacccgcagcctgcgcgcgcagaaggtgttcctggac
tggagtcagaacaacgcggccaagaccaccatcgccccgtactcgttacgtggccgcgac
tacccgaccgtcgccgcaccccgcacctgggatgagatcggagacccggatctgcgccat
ctgcgtttcgacgaagtgttgcagcggatttccgacgacggcgacctgctggccggcctg
gacgatgatgcaccggtagccgacaagctcaccacctaccggagcatgcgcgatgccacc
aagactcccgaacccgtgccccgtgacatcccggtgagggggaacaacgaccggttcgtc
atccaggagcaccatgcgcgacgcttgcactacgacctgcggctcgaacgcgatggcgta
ctggtgagttgggctgttcccaagaacctgcccgataccacggcagtgaatcaccttgcc
gtgcacaccgaagaccacccgatcgagtacctgacattccacggcaccatcccgaaggga
gagtacggcgccgggaacatggtcatctgggacaccggcacctacgaagcggagaagttc
cgtgtcccagccgatcccgacgattccgatgcgcccaagggcgaagtcatcttcaccctc
aacggcaaccgcatcgacggccgctatgcgctgatccagaccgagggtaagaactggttg
gcgcaccggatgaaggaccagtcctcggccgcacccgagcccaaggatttcgcgcccatg
ctcgccaccgagggatcggtggcgaagctcaaagccacgcaatgggcgttcgagggcaaa
tgggacggttaccgactgctggtcgaggccgagcacggacggctgcaactgcgttcgcgc
cgcgggcgcgatgtgaccgccgaatacccccaattcgaagcgctggccgccgatctcgcc
gaccaccacgtggtgctcgacggcgaggcggtggcactcgatgaccatgggatgccgagt
ttccgcgagatgcagaatcgggcccgctccacgcgggtcgagttctgggcgttcgacatc
ctgtggctcgacggccggtcattgttgcgtgccaagtacaccgatcggcgaaagttgttg
gaggcgttggccgccggtggcggcctgatcgtgcccgagcagttggccggtgacggcccc
gaggccatggagcatgcccgcgagcacaagttcgagggcgtcgtcgcgaaaaaacgggac
tcgacatatcaacccggccggcggtcggcgtcctggatcaaggacaagatctggaacacc
caggaagtggtgatcggcggctggcgccagggagaaggtgggcgcagcagcggcatcggt
gcactggtgttgggggtcccgggcccccacgggctgcagttcgccgggcgggtcggcacc
gggttcaccgagaaagagctgaccaagctcaaggggatgctaaagcccctgcataccaag
gaatcgcccttcgacaagccactgccgaagctcgacgccaaaggggtcacgttcgtccgg
cccgagctggtgggagaggttcgctacagcgaacgcaccaccgaccatcgactgcgccag
cccagctggcgcggcctgcggccggacaaagcgcccgacgaggtggtgtgggagtga

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