KEGG   Myxococcus fulvus: LILAB_15900Help
Entry
LILAB_15900       CDS       T01558                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mfu  Myxococcus fulvus
Pathway
mfu03030  DNA replication
mfu03410  Base excision repair
mfu03420  Nucleotide excision repair
mfu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfu00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    LILAB_15900
   03410 Base excision repair
    LILAB_15900
   03420 Nucleotide excision repair
    LILAB_15900
   03430 Mismatch repair
    LILAB_15900
Enzymes [BR:mfu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LILAB_15900
    6.5.1.6  DNA ligase (ATP or NAD+)
     LILAB_15900
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LILAB_15900
DNA replication proteins [BR:mfu03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    LILAB_15900
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     LILAB_15900
DNA repair and recombination proteins [BR:mfu03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LILAB_15900
   NER (nucleotide excision repair)
    Other NER factors
     LILAB_15900
   MMR (mismatch exicision repair)
    Other MMR factors
     LILAB_15900
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AEI65083
UniProt: F8CIL7
LinkDB All DBs
Position
complement(3760176..3761771)
Genome map
AA seq 531 aa AA seqDB search
MRRLADLYETLDQTMSTNAKVEALARYFQEAPPEDAAWALYFLTGQKLKRLIPTKLLVGW
TQELTGIPGWLFEEVYASTGDLAEVIALLLDARERPARTEELPLSVWLEQRLLPLRRLDA
AGQREQVVSWWHAMPRRELFLLNKMLTGELRVGVSSTLVVRAVAQVAGLPAPSVAHRLMG
TWTPSATFFRQLVSPDVSDGDSSRPYPFYLASPLEQPAEDLGERAEWQVEWKWDGIRGQL
IRRKGSVHLWSRGEELITERFPEIADAAALLPDGTVLDGEVLAHADGRPLPFAQLQRRIG
RQKLTPKVLAEAPAAFMAYDVLELGGEDLRGQPLRERRAKLEALLQGMPRLPISPVVQAA
TWEDLATARGEARERNVEGFMLKRLASPYLTGRKRGDWWKWKIDPFTVDAVLLYAHPGHG
RRSSLYTDYTFAVWNGTELQPVTKAYSGLTDAEIGRLDRWIRAHTREKYGPVRSVEPEQV
FELHFEGIQSSPRHKSGVALRFPRIARWRTDKKPRDADTLDSLKELLHASG
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
gtgcggcgactggccgacctctacgagacgctggaccagaccatgtccaccaacgccaag
gtggaggcgctcgcgcgctacttccaggaagcgccgccggaggacgcggcgtgggcgctc
tacttcctcacgggccagaagctgaagcggctgattcccacgaagctgctggtgggctgg
acccaggagctgacgggcatccccggctggctcttcgaggaggtgtacgcctccacgggc
gacctggcggaggtgattgccctgctgctggacgcacgggagcgcccggcgcgcaccgag
gagctgcccctgtccgtctggctggagcagcgcctgctccccctgcggcggttggacgcc
gccgggcagcgcgagcaggtggtgtcctggtggcacgccatgccccggcgcgagctgttc
ctgctcaacaagatgctcaccggcgagctgcgcgtgggcgtgtcctccacgctggtggtc
cgcgcggtggcgcaggtggcggggctgcccgcgcccagcgtggcgcaccggctgatgggg
acgtggacgccctcggccaccttcttccggcagctcgtgtccccggacgtgtcggacggc
gacagctcccggccctaccccttctatctcgcctcaccgctggagcagcccgccgaggac
ctgggcgagcgggcggagtggcaggtggagtggaagtgggacggcatccgcggccagctc
atccgccgcaagggcagcgtgcacctgtggagccggggcgaggagctcatcaccgagcgc
ttccccgaaatcgccgacgccgcggccttgctgcccgacggtacggtgctggacggcgag
gtgctggcccatgcggacggaaggcccctgcccttcgcgcagctccagcggcgcatcggc
cggcagaagctgacgcccaaggtgctggccgaggcgcccgcggccttcatggcgtacgac
gtgctggagctgggcggcgaggacctccggggacagccgctgcgcgagcggcgcgcgaag
ctggaggcgctgctccagggcatgccgcggctgcccatctcccccgtcgtccaggcggcc
acgtgggaggacctggccaccgcgcgaggcgaggcgcgcgagcgcaacgtcgagggcttc
atgctcaagcgcctggcgtcgccgtacctcaccgggcgcaagcggggcgactggtggaag
tggaagattgacccgttcaccgtggacgcggtgctgctgtacgcacacccgggccacggc
cggcgctcgtcgctgtacaccgactacaccttcgcggtgtggaacggcacggagctgcaa
ccggtgacgaaggcctactccggcctgacggacgcggagattggccggctggaccggtgg
attcgcgcgcacactcgggagaagtacggccccgtgcgctcggtggagcccgagcaggtc
ttcgagctgcacttcgagggcatccaatcctcgccgcgccacaagtcgggcgtcgcgctg
cgcttcccccgcatcgcgcgctggcggacggacaagaagccgcgggacgcggacacgctc
gactcgctcaaggagctgctccatgccagcgggtag

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