Corallococcus macrosporus HW-1: LILAB_20175
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Entry
LILAB_20175 CDS
T01558
Name
(GenBank) sigma-54 dependent transcription regulator
Organism
mfu
Corallococcus macrosporus HW-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FHA
Yop-YscD_cpl
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_16
HTH_30
HTH_23
MCM
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEI65937
UniProt:
F8CBX1
LinkDB
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Position
complement(4759872..4761512)
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AA seq
546 aa
AA seq
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MPELVFFRRGEEVLRVGVDRARLVLGRGEQSDVAIPDPEVSRLQVALLWDGERCRVEDLS
GKGTTVAGQTVTQGELPDGADLALGQWRAVFRLSGGGEGADVTTEVGHTTSVQSRDTQAP
RWQPAQVRVKQGVNESVHRFTGEGFTAGKDPACDLVLQDRFASSRHLKVSRRDGVFHVVD
LRSTNGTWLGPVRLFEAEVTLPTVLRVGETELVLEPAAPATRKEPTSFHGIIGGDPSVRQ
LSELIERVAPSSAAVTILGESGTGKELVARAIHACSQRANRPLVPVNCAAISKELIESEL
FGHEKGSFTGAMGARKGAFEEADGGTLFLDEIGELPLDLQAKLLRALEGGEIKRVGASRP
QTVDVRVVAATNRDLLAAAREGRFREDLYYRLCVIPLHLPPLRSRKADLGSLAEHFVRTY
APRGQTVRFTPAALERLQHHAWPGNIRELRNVVHRALLLRKGPLIDAGDITFDQELNRET
GIAVPELPPGMTLEQMLEKLERQIVEAALRRYNNNRERVARELGVARSTLFKRLKDWGLT
KQDEQE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctggtgttttttcgtcgtggcgaggaggtgttgcgggtgggggtggaccgg
gcccggctggtgctcgggcgcggcgagcagagcgacgtcgccatcccggaccccgaggtg
agccgcctccaggtggcgctgctgtgggacggcgagcgctgccgggtggaggacctgtcc
ggcaagggcaccaccgtcgccgggcagactgtcacccagggcgagctgccggacggcgcg
gacctggcgctgggccagtggcgcgcggtgttccgcctcagcggcggcggcgagggcgcg
gacgtcaccaccgaggtgggccacacgacgtccgtccagtcccgggacacccaggccccg
cgctggcagccggcgcaggtgcgggtgaagcagggcgtgaatgagtccgtgcaccgcttc
accggggagggcttcaccgcggggaaggaccccgcctgcgacctggtgctccaggaccgc
ttcgcctccagccggcacctgaaggtgagccggcgcgacggcgtcttccacgtcgtggac
ctgcgctccaccaacggcacctggctgggcccggtgcgcctcttcgaggcggaagtcacg
ctgcccaccgtgctgcgcgtgggcgagacggagctggtgctggagcccgccgcgcccgcc
acgcgcaaggagcccacgtccttccacggcatcatcgggggcgacccgtcggtgcggcag
ctctcggagctgattgagcgggtggccccctcctccgcggcggtgacgattctgggcgag
tccggcaccggcaaggagctggtggcccgcgccatccacgcctgctcgcagcgggcgaac
cggccgctggtgcccgtcaactgcgcggccatctccaaggagctcattgaaagcgagctc
ttcggccatgagaagggctccttcacgggcgccatgggcgcgcgcaagggcgccttcgag
gaggccgacggcggcacgctgttcctggacgagattggcgagctgccgctcgacttgcag
gccaagctgctgcgcgcgctggagggcggcgaaatcaagcgcgtgggcgccagccgcccg
cagacggtggacgtgcgcgtggtggcggccaccaaccgggacttgctggccgcggcgcgc
gagggccgcttccgggaagacttgtactaccggctctgcgtcatccccctgcacctgccg
ccgctgcgcagccgcaaggcggacctgggctcgctggcggagcacttcgtgcgcacctac
gcgccgcgcggacagacggtgcgcttcacgcccgcggcgctggagcggctccagcaccac
gcgtggccgggcaacatccgcgagctgcgcaacgtggtgcaccgcgcgctgctgctgcgc
aaggggcccctcatcgacgcgggggacatcaccttcgaccaggagctgaaccgcgagacg
ggcatcgcggtgccggagctgccgccgggcatgacgctggagcagatgctggagaagctg
gagcgtcaaatcgtcgaggcggcgctgcggcggtacaacaacaaccgcgagcgcgtggcc
cgggagctgggcgtggcccgctccaccctcttcaagcggctgaaggactggggcctcacg
aagcaggacgagcaggagtag
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