Mycolicibacterium gadium: MGAD_33050
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Entry
MGAD_33050 CDS
T07053
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgad
Mycolicibacterium gadium
Pathway
mgad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGAD_33050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgad03400
]
MGAD_33050
Enzymes [BR:
mgad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MGAD_33050
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MGAD_33050
DNA repair and recombination proteins [BR:
mgad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MGAD_33050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
zf-TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBZ18970
UniProt:
A0A7I7WPE1
LinkDB
All DBs
Position
complement(3342024..3342887)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLTIGRIDVSAFSVLKTFDPAISVLHGQTVTGANRWGKYLG
LQSGDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGEAAGFDLTEAGTQK
RLAVWLVDDPAKVPGIAALGPDALSLGPEDLAAVLAGNSGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLTEAQLSALHDAMISVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCATCQTGGKILADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcctgaggtcgaagcgctcgccgatcacttgcgtcgccatgccgtcggt
ctgaccatcggacggatcgacgtgtcggcgttctcggtgctcaagacgttcgacccggcg
atctcggtgctgcacggccagaccgtcaccggcgccaatcgttggggcaagtacctcggc
ctgcagtccggcgacttgcatctgatcacgcacctgtcgcgggccggctggctgcggtgg
tcagacaagctcgcggcggcgccgttgaagcccggtaagggaccgatcgcgctgcgcgtg
cacctaggcacaccgggggaggcggcgggcttcgacctcaccgaggccgggacgcagaag
cggctggcggtgtggctggtcgacgatccggccaaggtgccgggcatcgccgcgctcggg
cccgatgcgctgtcgcttggaccggaggacctggccgccgttcttgccgggaacagcggc
cgaatcaagaccgtgatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gatgagatcctgcacgttgcgaagatctcgccgttcgcgacggcgggcaagctcaccgaa
gcgcagctctccgcattgcacgacgcgatgatctccgtcctcaccgatgccgtgagccga
tccgtgggtcagggggccgcaacgctgaagggggagaagcgatccgggctgcgcgtacac
gcccgtaccggcctgccatgtccggtgtgcggcgatacggtgcgcgaggtgtccttcgcc
gacaagtcgttccaatactgcgcgacgtgtcagacgggcggcaagattctggcggaccgg
cgaatgtcgcgtctgctcaagtag
DBGET
integrated database retrieval system
