Marinobacterium iners: CFI10_18565
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Entry
CFI10_18565 CDS
T07136
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFI10_18565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_18565
Enzymes [BR:
mgeo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFI10_18565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFI10_18565
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFI10_18565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QSR36946
LinkDB
All DBs
Position
complement(3959123..3959935)
Genome browser
AA seq
270 aa
AA seq
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MPELPEVETTCRGIAPHIVHQRVTRLEVRQSRLRWPIPEQLAQWVEGDEVRCVERRAKYL
LLSFSRGQMIVHLGMSGSLRILPQGTVPGKHDHVDLVLASGQLLRLTDPRRFGAVLWQEN
GTEHSLLAHLGPEPLSEDFTAEYLQTACKGRRTAIKALIMNAQVVVGVGNIYANEALYRA
GIDPRRAAGRISAERLSVLVETIKTVLAAAIEQGGTTLRDFVGGDGKPGYFSQVLDVYGR
GGQPCNGCGEHLTEIKLGQRSTVFCRRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgccagaagttgaaaccacatgccgtgggattgcgccccatattgttcat
cagcgtgtcacgcggctggaggtgcgtcaatccagactgcgctggcccattcccgagcag
ttggcacaatgggttgaaggtgatgaggtgcggtgcgtcgagcggcgtgcgaagtatctg
ctgctgagtttcagtcgaggacagatgatcgtgcacctgggtatgtcaggcagtctgcgc
atcctgccgcaggggacggttccgggcaagcatgaccatgtggatctggtgctggcgtcc
gggcagctgctgcggctgactgatccacgtcgcttcggtgccgtgctgtggcaggaaaac
ggtaccgaacacagcctgctggcccatctggggccggagccgctgagcgaggactttacc
gccgagtatctgcagaccgcctgcaaagggcgcagaacagcaatcaaggccctgatcatg
aatgcgcaggttgtggtcggggtcggtaacatttatgccaatgaagccctgtatcgtgcc
ggaatcgatccacgccgagcggcggggcgtatctctgcagagaggctgtcggtactggtt
gaaaccatcaagactgtacttgcagccgccattgaacagggaggcaccactttgcgcgac
tttgtggggggcgatggcaagcctggctacttcagtcaggtgctggatgtgtatggccga
ggtggtcagccctgcaatggttgtggcgagcaccttaccgaaataaagctgggtcagcgc
agtactgtattctgtcgccgctgccagcgttga
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