Meleagris gallopavo (turkey): 100539415
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Entry
100539415 CDS
T01523
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100539415 (TNRC6A)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100539415 (TNRC6A)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100539415 (TNRC6A)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100539415 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100539415
NCBI-ProteinID:
XP_031411703
Ensembl:
ENSMGAG00000006455
LinkDB
All DBs
Position
16:6690868..6721833
Genome browser
AA seq
1920 aa
AA seq
DB search
MEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTATSTNNNAKRA
TANNQQQQTLPRYPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTV
TTKQPVTNGEVPNSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSES
STNWDKVIVDGSDKEAWPSITGSDPELTSECMDTDSASSSGSERNLIIMASGSTGGENDG
IRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAPDSKSESSNNRM
NAWGTINSSSNGGLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNSGTNIQCSTIGQIS
NSQSINSKVGGSAHGSWGGLQENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSS
LPNSAGSAQINELPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNGEAKNGGSYGTT
WGAYGSNYSGDKCSGPNSQANGDTVNATLMQSGISGPGSTNFQINGNKGGGVWEAGTVNS
QNMPWGSGNGASAGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNDSVNGNTRKFTNGW
KSTEEDDLNSQSSAVSQITEQNSAWAKTGTGDGEGSTESTGCHEDRVATEGQNRERRKVD
QHALLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQ
TSSSGGCVDRPSPNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQS
WGSGKEEKSSWNDTQKMKQGWVEGQKASQGWAVSASDSWGENSRSNHWGETKKSSSGGSD
SDRSVSGWNEPGKSNSVTWGGSSNTNPNNSSGWDEPAKSNQNQGWGDPPKSNQPQGWGDS
SKPINSPEWNKQDVGSWGAPSATNKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKM
EIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSG
WGEPSTPATTVDNGTSAWGKPMDTGTSWGEPISDAGGTSGWGNASLGQQAPNKPGPKSMQ
DSWCGDDMPLTGSRQTSWEEEEDVEIGMWNSSSSQEANTSLNWPPYMKKMPTKGIMKGGN
KQDEAWINPFIKQFTNLSFSRESPEETIQSNKMDMSGGILQDKRMEIDKHGLNVGDYNRV
VGKGPGSRPQISKESSMDRSPYFDKDGIVADESQNMQFMSNQNMKLPPSNSALPNQALGS
LAGLGMQNLNSVRQNGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQ
VPVSLLKYAPNSGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKVQNQRSMPS
GGRQQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHA
TPELQKGPSPINSFSSFPIGFSPISTSEIPGMNSNLNVNMDMSSIKEPQQSRLRKWTTVD
SISVNTSLEQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNG
SSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSS
LNTTLPSTSAWSSIRASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVP
LPPKSITAPSRPPPGLTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNW
LVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLG
NTTILAEFASEEEISRFFAQGQSLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNG
AGLSGTSSGDLHGTSLWGSPSYSTSLWGTPSSNDTRGISSPSPINTFLSVDHLGGGGESM
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggaaaaagagaaaagaagacaagaagaagaaggaagctgctcaaaaaaag
gccattgaacaaaaaatcaaagtgccagaacaaaccaagacaagtgtaagccagcctcag
cctgtcacctctaacggcacttccacagcaaccagcactaataataatgccaagcgggcc
acagccaacaatcagcagcagcaaaccttgcctcgataccctcctcgtgaagtaccaccg
cgatttcgacaccaggaacagaaacagcttctgaaacgaggtcagcagttaccagttata
gctgcaaacctgggatctactcctaaagtattaaacggccagtcaggaggcagcactgtc
acaaccaaacagccggtgaccaacggagaagtgccgaacagcagcaaaaaacagccaggc
atgcctcccattcgggacttggtgagccactcccctaaccagtcagatctgaaccacagt
ggtctaggatcccattatgaaaattctcactggggaccagtctcttcaaatagtgaatcc
agcacaaactgggataaagttattgtagacggctctgacaaagaagcatggccatcaatc
actggcagtgacccagagttgacatcagaatgtatggacactgactctgcctctagctct
gggtcagagagaaacctcattataatggcttcagggagcacaggtggtgaaaatgatggc
attcgaaatggcatcggacatggttctcaaaataagtttgtggttggtagcaacagcaat
aatgtgggcaatggaagtattaatgggccatggggtttatcccatgggaccataataagc
acatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagcaacaatagaatg
aatgcttggggcaccataaactcttcatcaaatggagggttaaatccaagcactttgaat
tcaaatggcaaccatggtgcctggcctgtattggagaacaatggacatgccctgaaaggg
tctgtagggagtggtaattctggcacaaatattcagtgcagtaccataggtcagatatct
aacagtcagagtattaactctaaagtgggtggttcagcccatggttcctggggaggcctt
caggaaaattgtgattctgaagtaaatggtacaaggaaggtttcattcagtgggcaacct
caaaaccttaacactgaaatgaatggaccaaataacactactaactttatgacctctagt
ttaccaaactctgctggttcagcgcagattaacgaactgcctaataatacagggcatggg
gcctggcgtgtgagcacaatgaatcattctcagattcaggcctctccagttacaaatggc
acttccatttctcaccttagcaatggtgaggcgaaaaatggtggatcttatggtactaca
tggggtgcctatggttctaattactctggagacaaatgttcaggcccaaacagccaagct
aatggtgacactgtgaatgcaactctaatgcagtcaggcattagtgggcctggcagcact
aactttcaaatcaacgggaataaaggaggaggggtgtgggaagcagggacagtcaactcc
cagaatatgccatggggaagtggaaatggtgcaagtgctggcggaagtagaagaggatgg
ggcaaccctgcacaaaacactggcactaacatttcaaatggtgaatggagtaaactgcct
agtaatcagcattccaatgacagtgtaaatggaaataccaggaagtttacaaatggatgg
aaatctactgaagaggatgaccttaacagccagagttctgctgtgtctcagataactgag
cagaatagcgcgtgggccaaaacaggtacaggggacggagaaggtagtacagagagcact
ggatgccatgaagatagagtagctacagaaggacagaatcgagagagaagaaaagttgac
cagcatgcattactccaaagtatagtaaacagaactgacttagatccacgtgtcctttcc
aattctggttggggacagactccgatcaaacagaacactgcctgggataccgaaacatca
ccaagaggtgaaagaaaaactgacaatgggacagaggcctggggaggctctgtgacacag
acttctagctcagggggatgtgtggatagacctagccctaataataatgatacctcatct
gtatcagggtggggagatccaaagtctgctacaaggtggggagactccaaagggtcaaat
agccaaggggggtgggaagaggattctgctgctacagtaatggtcaagagcaatcaatca
tggggaagtggcaaagaggaaaagtcatcttggaatgacacgcagaagatgaaacaggga
tgggtagaaggacagaaggccagccagggttgggctgtttctgccagtgacagctggggt
gaaaattcaagaagtaaccattggggtgagactaagaaatccagttcaggaggtagcgac
agtgacagatcagtatctggttggaatgagccaggtaaatcaaattctgttacttgggga
ggtagtagtaatacaaacccaaataattcttcaggatgggatgagcctgcaaagtctaat
cagaaccagggctggggagaccctcctaaatccaatcagcctcaaggttggggggattca
tcaaagccaatcaactctccagaatggaacaaacaagatgttggatcttggggagcaccg
tctgccaccaataaaccaccgggctcaggctggctggggggaccaatgccagctccagca
aaggaagaggaacccactggctgggaggagccatcccctgaatcaatacgccgcaaaatg
gaaattgatgatggaacttctgcttggggtgatccgagcaaatacaactacaaaaatgtg
aatatgtggaataaaaatgtcccaaacagtagcagcagttcagaccagcaagcacaggta
catcagcagctactgtcttcaagtgccatgtctagcaaggagagcagttcgggttctggt
tggggagagccttctactccagccactactgtagataacggaacgtcagcgtggggtaag
cccatggatactggtactagctggggagaacccatcagcgacgcaggaggcacctctggc
tggggaaacgcttctcttggtcaacaggctccaaataaacctgggcctaaatctatgcaa
gatagttggtgtggagatgatatgccattgacaggcagtcgtcagaccagctgggaggaa
gaagaggatgtagagattggaatgtggaacagcagttcttcacaagaagctaacacatct
ttgaactggccaccctatatgaagaaaatgcccacaaagggaataatgaaaggtggaaat
aagcaagatgaagcatggatcaatccattcattaagcaattcacaaatctcagtttttca
agagaatcaccagaagaaaccatacagagcaataagatggacatgtctggagggatattg
caagataagagaatggagattgataagcatggcctcaatgttggagattacaatcgtgtg
gttggaaaaggccctggttctcgtcctcagatttccaaagagtcttccatggatcgcagt
ccttattttgataaggatggcattgtagcagacgagtcccaaaacatgcagtttatgtcc
aatcaaaacatgaagcttcccccttcaaatagtgcactacctaaccaagcccttggctcc
ctggcagggctgggtatgcaaaacttgaattctgttagacagaatggcaatcccagtgtg
tttggtgttggtaatatagcagcacagcccaggagcatgcagcagcctccagcacaacct
cttaattcatctcagcctaatccacgtgctcaagtgcctcctccattactatcccctcag
gttccggtatcattactgaagtatgcaccaaacagcggtggcctgagtccactttttggc
ccacaacaggtagccatgttgaatcaactgtcccagttaaaccagctttctcagatctcc
cagttacagcggttgttggctcagcagcaaaaagtgcagaatcaaagaagcatgccttct
ggtggtcgtcaacagcaggagcagcagggtcgatctcttagtatgcagcaacagatgatg
caacagtcccgtcagcttgatccaaacctgttaatgaagcagcaaactccaccctctcaa
cagcagtcactccatcaacccaccatgaaatctttccttgagaatgtcataccccatgct
actcctgagctacagaaagggccatcaccaataaattcattcagcagcttccctataggc
ttcagtccaatttctacttcagaaattccaggaatgaactcaaacttgaatgtaaacatg
gatatgagcagtattaaagagccacagcaatctcgattgagaaaatggactacagtagac
agcatttctgtgaacacatctttagagcaaaactccagcaaacatggtgctatttcaagt
ggttttaggctggaagagtctccgtttgttccatatgactttatgaacagcagtacttca
ccagccagtcctcctggatctattggggacggctggccccgtgccaaatcgcctaatggc
tctagcagtgttaactggccaccagaatttcgtcctggtgagccatggaaaggttatcca
aacatcgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttca
attaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatct
ttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaat
gtttccctcagcagtacagcacaaagcacttcagtagccagaaacagtgattccaaatca
acatggtctcctggatcagtcactaacacctctctggctcatgagctgtggaaggtccct
ttgccacctaaaagcatcactgctccatcccgcccacctccagggctaacaggccagaaa
ccacctttgtccacttgggataattcccttcgtttgggtggaggatggggaaattctgat
gccagatatacccctggttcaagctggggtgagagcagctcagggagaataacaaattgg
cttgttctgaagaaccttacacctcagatcgatggctcaaccctgcgtactctgtgcatg
cagcacggtccactaataacattccaccttaacctcccacatggtaatgctttggtccgt
tacagttcaaaagaagaggtagtgaaggcacaaaaatctctgcacatgtgtgttttaggg
aacactactattcttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaa
ggccagtctctgactccgtctcctggctggcaatctcttggatccagccagaaccgactc
ggatccattgatggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggt
gctgggctgtcgggaactagcagtggagaccttcatggcacttcactttgggggagcccc
agctattccacgagcctgtggggcaccccgagcagcaatgacaccaggggaattagcagc
ccatcccccatcaacactttcctttctgttgaccacctaggtggaggtggagagtccatg
taa
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