Meleagris gallopavo (turkey): 100540402
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Entry
100540402 CDS
T01523
Symbol
TNC
Name
(RefSeq) tenascin isoform X12
KO
K06252
tenascin
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04510
Focal adhesion
mgp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100540402 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100540402 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mgp00536
]
100540402 (TNC)
Glycosaminoglycan binding proteins [BR:
mgp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100540402 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
NDNF
hEGF
DUF4998
Filamin
Big_5
Motif
Other DBs
NCBI-GeneID:
100540402
NCBI-ProteinID:
XP_010719111
Ensembl:
ENSMGAG00000003049
LinkDB
All DBs
Position
19:complement(2514216..2611763)
Genome browser
AA seq
1916 aa
AA seq
DB search
MGLPSQVLACAILGLLYQHASGGLIKRIIRQKRETGLNVTLPEENQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLNRLEELEGLVSSLREQCASGAGCCPNSQTAEGRLDTAPYCSGHGNYSTEICGCVCEP
GWKGPNCSEPACPHNCLNRGLCVRGKCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVC
FEGYTGPDCGEELCPHGCGIHGRCVGGRCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCDEGYTGEDCSELICPSDCFDRGRCINGTCFCEEGYTGEDCSELTCPNNCNGNGRCKNG
LCVCHEGFVGDDCSQKRCPKDCNNRGRCVDGRCVCHEGYLGEDCSELRCPNDCNSHGRCV
NGQCVCDEGYTGEDCGELRCPNDCHNRGRCVNGQCECDEGFIGEDCGELRCPNDCHNRGR
CVEGRCVCDNGFTGEDCGELSCPNDCHQRGRCVDGRCVCHEGFTGEDCRERSCPNNCNNV
GRCVEGRCVCEEGYMGIDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLVTYVPTSS
GGLDLQFTVPGNQTSATIRELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLKFK
SVRETSVQVEWDPLSISFDGWELVFRNMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNV
SLHIVKNNTRGPGLSRVITTKLDAPSQIEAKDVTDTTALITWSKPLAEIEGIELTYGPKD
VPGDRTTIDLSEDENQYSIGNLRPHTEYEVTLVSRRGDMESDPAKEIFVTDLDAPRNLKR
VSQTDNSITLEWKNSHANIDNYRIKFAPISGGDHTELTVPKGNQATTRATLTGLRPGTEY
GIGVTAVRQDRESAPATINAGTDLDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYIS
PSGKKNEVEIPVDTTSYILRGLDAGTEYTISLVAEKGRYKSKPTTVKGSTAHLITTSGEP
DSATSFNATSPAPTELSHLSNPSTAPHALPLVPTDLPISEVTDALHDLNITHRTFSSFTL
SWAAQDEVFDQFLITLKDLSSLNRTQEFFLLGNQRETEITNLTAGTQYQINLRGSTQGQL
SWGLEALAATEKEPELGNLSVSETGWDGFQLTWTAADGAYENFVIQVQESDNPEETWNTT
VPGRQHSVNITGLKANTPYNITLYGVIRGYRTKPLSVETTTGAHPEVGELTVSDITPESF
NLSWTTTNGDFDVFTIEIIDSNRLLEPMEFNISGDSRTAHISGLSPSTDFIVYLYGMSHG
FRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKIRDTKRKSDPLE
LIVPGHERTHDITGLKEGTEYEIELYGVSSGRRSQPINSVATTVVGSPKGIAFSDITENS
ATVSWTPPRSRVESYRVSYVPVTGGTPNVVTVDGSKTRTKLVKLIPGVDYNVNIISVKGF
EESEPISGILKTALDSPSGLVVMNITDSEALATWQPAIAAVDNYVVSYSSEDEPEVTQMV
SGNTVEYDLNGLRPATEYTLRVHAVKDVQKSETLSTQFTTGLDAPKDLSATEVQAETAVI
TWRPPRAPVTDYLLIYESIDGKVKEVILDPETTSYTLTELSPSTQYTVKLQALSRSMRSK
TIQTVFTTTGLLYPYPKDCSQALLNGEVTSGLYTIYLNGDRTQPLQVFCDMAEDGGGWIV
FLRRQNGKEDFYKNWKNYVAGFGDPKDEFWIGLENLHKISSQGQYELRVDLKDRGETAYA
VYDRFSVGDAKTRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAITNCALSYKGAFW
YKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgggacttccttcccaggttttggcctgtgccatcttaggtttgctgtaccagcatgcc
agcggtgggctcatcaagcgaatcatccggcagaagcgggaaactgggctcaatgtgacc
ttaccagaggaaaatcagcccgtggtttttaaccacgtctacaacatcaagttgcctgtt
ggctccctttgctctgtggacctggacacagcaagcggggacgcagacctgaaggcagaa
attgagcccgtcaagaattacgaggaacatacggtgaatgaagggaaccagatcgtcttc
acgcatcgcatcaacattccccgccgggcctgtggctgtgcggcagccccagacatcaag
gacctgctgaacagactggaggagctggaagggctggtatcctccctccgggagcagtgt
gccagcggggctggatgctgtcctaattcccagacagcagaaggtcgcctggacacggcc
ccctattgcagtgggcacggcaactacagcaccgagatctgcggctgcgtgtgcgagcca
ggctggaaaggccccaactgctccgaaccagcctgcccacacaactgcctcaaccgcggc
ctctgtgtgcggggcaaatgcatctgcgaggaaggcttcaccggcgaggactgcagccag
gctgcctgcccgtctgactgcaacgaccaaggcaagtgtgtggatggggtgtgcgtctgc
ttcgagggctacacaggcccggactgcggcgaggagctctgcccccacgggtgtggcatt
cacgggcgctgtgtgggcggacgctgtgtgtgccacgagggtttcaccggcgaggactgc
agtgagcccctgtgccccaacaactgccacaaccgtgggcgctgcgtggacaacgagtgc
gtctgcgatgagggctacacaggggaggactgcagcgagctgatctgccccagcgactgc
ttcgaccgcgggcgctgcatcaatgggacctgcttctgcgaggagggctacactggagag
gactgcagcgagctgacctgccccaacaactgcaatggcaacgggcgctgcaagaacggg
ctgtgcgtgtgccacgagggcttcgtgggggatgactgcagccagaagaggtgcccgaag
gactgtaataaccgcgggcgctgcgtggatgggcgctgcgtgtgccacgaggggtacctg
ggggaggactgcagcgagctgcggtgccccaacgactgcaacagccatgggcgctgcgtc
aatgggcagtgcgtgtgtgacgaggggtacacaggggaggactgcggggagctgcggtgc
cccaacgactgccacaaccgcgggcgctgcgtcaatgggcaatgtgagtgtgatgaggga
ttcatcggggaggactgcggggagctgcggtgccccaacgactgccacaaccgcgggcgc
tgcgtggagggacgctgcgtgtgtgacaacggtttcaccggggaggactgtggggagctg
tcttgtcccaatgactgccaccaacgcgggcgctgcgtcgatgggcgctgtgtgtgccac
gagggcttcaccggggaagactgccgggaacggtcctgccccaacaactgcaacaacgtg
ggccgctgtgtcgagggacggtgtgtctgtgaggaaggttacatggggatcgactgttct
gatgtgtctcctccaacggaactgactgtaacgaatgtcacggataaaactgtaaatctg
gaatggaagcatgagaatctcgtcaatgagtaccttgtcacctatgtccctaccagcagc
ggtggcttagatctgcagttcactgtaccaggaaaccagacatctgccactattcgtgag
ctggagccgggtgtggaatacttcatccgtgtctttgcaatccttaaaaacaagaaaagt
attccagtcagtgccagagtagcgacatatctgcctgctccagaaggtctgaaattcaaa
tctgttagagaaacatctgtccaggtggagtgggatcctctgagcatttcctttgatggc
tgggagctggtctttcgtaatatgaaaaaggatgataatggagacataaccagcagcttg
aaaaggccggagacatcatatatgcagccaggcttggcaccaggacaacagtataacgta
tcccttcatatagtgaaaaacaataccagaggaccagggctatcccgtgtgataaccaca
aaacttgatgcccctagccagattgaggcaaaagatgtcacagacaccacagctctgatc
acatggtccaaacccttggctgaaattgaaggcatagagctcacatatggccccaaggat
gttccaggggacaggactaccattgacctctctgaggatgaaaaccaatattctattgga
aacctgaggccacacacagaatatgaagtgacactcgtctctcggcgaggggacatggaa
agtgaccctgcaaaagaaatctttgtcacagacttggatgctccacgaaacctgaagcga
gtgtcacagacagacaacagcattactttggagtggaagaacagccatgcgaatattgat
aattaccgaattaagtttgctcccatttctggtggagaccacactgagctgacagtgcca
aagggcaaccaagcaacaaccagagctacactcacaggtttgagacctggaactgaatat
ggcattggagtgacagcagtgagacaggacagggaaagtgctcctgctaccattaatgct
ggcactgatcttgataaccccaaagacttggaagtcagtgaccccactgaaaccaccctg
tcccttcgctggagaagaccagtggccaaatttgatcgttaccgcctcacttacattagc
ccctctggaaagaagaatgaagtggagatccctgtggacaccacctcttatatcttgaga
ggattagatgcagggacagagtacaccatcagtctggtggcagagaaaggcagatacaaa
agcaaacccacaaccgtcaaaggttcgactgcacatctaatcacaacatctggagaacca
gacagtgcaacatcatttaatgctaccagtcctgctcccacagagctaagtcacttatca
aaccccagcactgctccccatgctctgcctttggtgcccactgaccttcccatctcagaa
gtcactgatgctcttcatgaccttaacataacccacaggactttcagtagtttcaccctg
tcttgggcagcacaggatgaggtatttgatcagttccttatcactctgaaagacctgtcc
agtttaaacagaacacaggaattctttttgctgggaaaccaacgagaaacagaaattacc
aatctcacagctggcactcaataccagattaacctccgtggaagcactcaaggccagctg
tcttggggcctggaagctctagctgctacagagaaagaacctgagcttggaaacttatca
gtgtcagagactggctgggatggtttccagctcacctggacagcagccgacggggcctat
gagaactttgtcattcaggtgcaggagtctgacaatccagaagagacctggaacacgaca
gtccccggcagacagcactctgtgaacattacaggcctcaaggccaacacaccttataac
atcacactttacggtgtgattcgaggctacagaaccaaacccctttctgttgaaaccaca
acaggagcacaccccgaagttggtgagctaaccgtttccgacattactcctgaaagcttc
aacctttcttggacgaccaccaatggggactttgacgtctttactattgaaattattgat
tctaacaggttgctggagcccatggagttcaacatctcaggcgattcaagaacagctcat
atctcagggctttcccccagcactgattttattgtctacctctatgggatgtctcatggt
ttccgcacacaggcaataagtgctgcggctacaacagaggcagaacccgaggtcgacaac
cttctggtttcagatgctaccccagacggcttccgtctgtcctggactgcagatgatggg
gttttcgacagttttgttctaaaaatcagggataccaaaaggaaatctgatccactggaa
ctcatagtaccaggccatgagcgcacccacgatataacagggctgaaagagggcactgag
tatgaaattgagctctatggagttagcagtggacggcgctcccaacccataaactcagta
gcaaccacagttgtgggatctcccaagggaattgctttctcagacatcacagaaaactct
gctacagtcagctggacccccccccgcagccgcgtggagagctacagggtctcctatgtc
cccgtcacaggcggcactcccaatgttgttacagtcgatggaagcaagacaaggacaaag
ctggtgaagttaatcccaggtgtagactacaatgttaatatcatctctgtgaaaggcttc
gaagaaagtgaacccatctctggaattctgaaaacagctctggacagcccatcaggactg
gtagtgatgaacattacagactcagaggctctggcaacctggcagcctgcaattgcagct
gtggataattatgttgtctcctactcttctgaggatgagccagaagtcacacagatggta
tcaggaaacacagtggagtatgacctgaacggccttcgacctgcaacggagtacaccctg
agggtccatgctgtgaaggatgtacagaagagtgagaccctctccacccagttcactaca
ggactcgatgctccaaaagatttaagtgctactgaggtccaggcagaaacagctgtgata
acatggaggcctccacgtgctcctgtcactgattacctcctgatctacgagtccattgat
ggcaaagtcaaggaagtcatcctagaccctgagacgacctcctacaccctgacagagctg
agcccatccactcaatacacagtgaaactccaggcactgagcagatctatgaggagcaaa
acaatccagaccgttttcaccacaactggtcttctttatccttatcctaaagattgctcc
caagctctcctgaatggagaggtcacctctgggctctacactatttatctgaatggagac
aggacacagcctctgcaagtcttctgtgacatggctgaagatggaggtggatggattgtg
ttcctgaggcgccaaaatggaaaggaagatttctacaagaactggaagaattacgtggcc
ggatttggagatcctaaggatgaattctggataggtctggagaacctccataaaatcagc
tctcaggggcagtacgagctgcgtgtggatttgaaagacagaggtgagacagcctacgct
gtgtacgacaggttcagcgttggagatgccaagacccggtaccggctgagggtggatggc
tacagtggaacagcaggtgactccatgacctaccataatggaagatccttctccactttt
gacaaggacaatgattctgctatcaccaactgtgctttgtcatacaagggtgctttctgg
tacaagaattgtcatcgagtcaatctgatgggcagatatggtgacaacaaccacagtcag
ggtgttaactggttccactggaagggccacgaatactccatccagtttgcagagatgaag
ctgagaccctccagctttcgaaatctggaaggaagacgaaagcgagcataa
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integrated database retrieval system