Meleagris gallopavo (turkey): 100551140
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Entry
100551140 CDS
T01523
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100551140 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100551140 (LIG4)
Enzymes [BR:
mgp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100551140 (LIG4)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100551140 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
SKA1
Motif
Other DBs
NCBI-GeneID:
100551140
NCBI-ProteinID:
XP_003203267
Ensembl:
ENSMGAG00000015532
UniProt:
G1NR93
LinkDB
All DBs
Position
1:136264243..136268614
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AA seq
912 aa
AA seq
DB search
MASAPASQLSPKRTVASHVPFADLCSTLERIQKCKSRPEKTKYFKDFLDSWRKFHSALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKRGRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHNVFKNDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMINDQKLGHESLSKRYKILNNVFTPVTGRIHVVHKKSARTRKEVI
DALNEAIDNREEGIMIKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPAPNEKPTAFHSICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
LDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGIAEQFKAPDLSNVNKV
SSVFEDVEFCVMTGTGRYSKSELESKIAECGGSVVQNPGPDTYCVIVGAENVRVKNIIAS
NKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLK
EVFSRVKDNKRMPLDLIAELEERYSWNSCQLCIFRGNTIYVDYYATINKPSTKIHGTRLS
VRALELRFYGAKVVPLLEEGVSHVVIGEDHSRVKEVKALRRMFGKKFKIVSELWVTVSIK
EGAPKNENQFLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacccgcctcacagctttctcctaaaagaacagtggcctcacatgtgcct
tttgcagacctgtgttccaccctggagcgaatacagaagtgtaaatcccgtccggagaaa
actaagtacttcaaggatttcttggattcctggaggaaattccacagtgctctccatcaa
aaagagaaagatgtcaccgattctttctatcctgctatgcgacttattcttccacagctg
gaaagggaaaggatggcgtatggaattaaggaaaccatgcttgcaaagctttacattgag
ctgcttaacctaccaaaagatggaaaggatgctgtgaagcttttaaattacagaacgccc
actggttcacgaggagatgccggagactttgcaatgattgcatactttgtgttaaaaccc
cgaagccctaagcgaggcaggttgactgtagagcaggtcaatgaactgctggatgccatt
gcaaacaacaatgctgcaaaaaacaagggactggtaaagaaaagccttcttcaattaatt
acccaaagcacagcactcgagcaaaagtggcttatccggatgattataaaggatctaaaa
cttggtgttagtcaacaaacgatattttcaatttttcatcctgatgctgctgaattacac
aatgtcacaacagatttggaaaaagtttgtaggcagctgcacgatccctctgtctcactt
agcgatgtttctatcatgttattttctgcctttaaaccaatgctcgctgctattgctgac
gtccagcaaattgagaagcagatgaataaccaggtattctacatagaaactaaactggat
ggtgaacgtatgcagatgcacaaagatggtgatgtgtataaatatttttccagaaacggg
tttgactatactcagcagtttggtgcttcccctcttgatggctcattaacaccgtttatt
cataatgtatttaaaaatgacatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgaaacacaaacctttatgcaaaaaggaaacaaatttgacatcaaaagaatggta
gaggactctgatctgcagacctgcttctgtgtgtttgatgtattaatgataaatgatcag
aagttgggtcatgaatccctgagcaaaagatacaagatcttaaataatgtatttacccca
gtaacaggcaggatacatgttgtacataaaaaaagtgccaggacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaagggattatgataaaagatcccatg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccggaatatgtc
aacgggctgatggatgagctagatcttcttattgttggtgggtactggggaaaaggctca
cgtggtggaatgatgtctcattttctgtgtgctattgcagaaactccagctccaaatgaa
aaacctactgctttccactctatttgtcgtgttggctctggctacactatgaaggagtta
tatgatctgggtttgaaactggctaaacattggaagccttacaataggaaggaccctcct
tgtaacattttgtgtggcactgaaaaacctgaaatgtacattgagccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtacaaaactgactgtact
ttgagattccccagaattgaaaaaataagagaggacaaagaatggtatgaatgcatgact
ttggacatgctagaacatcttagaagcagagcagaagggaagctggcatccaagcaccta
tatattgatgaatatgatgagccacaagagaagaaaaggagaactgtaccaaaggtgaag
aaggtaattggaatagctgagcaatttaaagctcccgatctttctaatgtcaacaaagtt
tccagtgtgtttgaggatgtagaattttgtgttatgacaggaacaggaagatactccaag
tctgaactggaaagcaaaatagctgaatgtggtggcagtgtggtacagaaccctggacct
gacacttactgtgtcattgtaggagctgagaatgtcagagttaaaaacatcattgcttcc
aacaaatatgatgtggttaaagcagagtggcttcttcagtgttttcagtccaaaatgctg
gtaccttggcagccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgctatggagacagctacacagcagatacagatgttgcacaactcaag
gaagtgttctcaagagtgaaggataataagaggatgcctttggacttgattgctgagtta
gaagaacgatactcatggaacagctgtcaactgtgtatattcagaggaaacactatttat
gtggactattatgctactattaacaagcccagtaccaaaatccatggcacaagactatca
gttagagctttggagctccgtttttatggtgcaaaagtagttcctcttcttgaggaaggt
gtgtcccatgttgttataggagaagatcattcccgggtaaaagaggtgaaagctctcagg
agaatgtttgggaaaaaatttaaaattgtatctgagctgtgggtaacagtgtcaattaag
gaaggagccccaaagaatgaaaatcagttcttaatttaa
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