Pyricularia oryzae: MGG_08807
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Entry
MGG_08807 CDS
T01027
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MGG_08807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgr03041
]
MGG_08807
Enzymes [BR:
mgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MGG_08807
Spliceosome [BR:
mgr03041
]
Complex C
Other components
Step II factors
MGG_08807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_30
AAA_19
T2SSE
nSTAND3
ABC_tran
PhoH
AAA_7
TsaE
AAA_16
NB-ARC
SRP54
Myosin_head
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
2678973
NCBI-ProteinID:
XP_003719164
UniProt:
G4NFJ0
LinkDB
All DBs
Position
6:56103..60261
Genome browser
AA seq
1207 aa
AA seq
DB search
MDDLENLELLSLVSKVTSELKNHMGVDDKDLADYIIANRLECDGFEAFKKWMDSECEFPP
SLIESIDRLVRSMHPKLRNSSQNADLSAPTTTGRTQEQKNELFKGLAVADTQPALADEGP
DAIDDTLALLEGLAPKGKPEKKDTSRGANGHDDYRKEDRNGERTSYRKRSRSPEAGYGDS
RHRRKEQYRSRSRSRSRGKDQYGRRSRRDKYDDYNDGYDQKPARQDLDDTPVLQKVYDGH
VTGVKDFGAFVNLHGVKGKVDGLVHVSALTDGQRVSHPSDFVDKGQPVKVKVIKIEGSRI
GLSMKEVDQQTGEDLAPEVGFHSGANSMALGSRHNLSNGLLEDKAPDLSAIKNTLPGRKH
KKRMTSPERWEIRQMIASGVAKASDYPELEEDYNNALSGEGQMELEEDVDIEIRDEEPPF
LAGQTKQSLELSPIRVVKAPDGSLNRAAMAGTSLVKERKEIRQQEAEAAAQAAATNGKVD
LASQWEDPMADPDKRKFAADMRRTMQNRPSEAVPEWRQAIAPKNQSFGKRTNMTIKQQRE
SLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQPRRVAA
MSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIM
LDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFP
VEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPS
VPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQN
AYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQ
NLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADF
PMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHDPNGDHL
TLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCGSDTNRV
RQALCSGFFRNAARKDQQEGYRTLIEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMH
CTTSIEPKWLVDAAPTFFKVSASDKLSKRRQQERIQPLYNKFEGENDWRLSAQRRAGRGG
GGGGTWG
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggaaaatctcgagcttttatcccttgtctccaaggtgacgtcggagctc
aagaaccatatgggagtggatgacaaggaccttgccgactacatcatagccaaccgcctg
gaatgcgacggctttgaggccttcaagaaatggatggacagcgagtgcgagtttccacca
agtttgatcgagagtattgacagactggttcgctcgatgcacccgaagctcagaaacagc
agccaaaacgccgacctgtcagcaccgacgacaacggggcgaacgcaggagcagaagaac
gagctgttcaagggtcttgctgttgccgatacccagccagcccttgccgacgaaggaccc
gatgcgatcgatgatacccttgcgttgctggaaggcctggctcctaaagggaagccggag
aagaaggatacctcgaggggggctaatggtcacgacgactacaggaaggaggaccgaaat
ggagagaggacgtcgtatcggaagcggtctcgaagtccagaggctggttatggggattcg
cgtcacagaaggaaagagcaatacaggtctaggtctaggtctaggtcgagaggaaaggat
cagtacggccggcgcagtcgacgagacaagtacgacgactacaatgacggctacgaccag
aagccagcacgacaggatctggatgatacacccgtgttgcaaaaagtctacgatggacac
gtcacaggagtgaaggactttggtgcttttgtcaacttgcacggtgtcaagggtaaggtt
gacggtttagttcatgtctcggctctaacagatgggcaaagggtcagccatccatcggat
tttgtcgacaagggccagcctgtgaaagtcaaggtcatcaagatcgaaggctcacggatt
ggcctgtccatgaaagaagtcgatcaacaaacgggcgaggacttggcgccagaagtaggg
ttccattccggtgcaaattccatggctcttggttcaaggcacaatcttagcaatgggctg
ctagaagacaaggcgccagatctcagcgccatcaagaacacactacccggcaggaagcac
aagaagcgtatgacttcacctgaacgctgggaaatccgacagatgattgcttcgggtgtt
gccaaggcctccgactacccagaactggaagaggattacaacaatgcgctttcaggcgag
ggtcagatggagctggaggaggatgtggatattgagattcgagacgaggagccaccattt
ttggctggtcagaccaagcaatcccttgagctgtcgccaatcagggtggtcaaggcacct
gacgggtctctcaaccgtgcagccatggcaggcacctcgttggtcaaggagcgaaaggaa
atccggcaacaggaggctgaagccgctgctcaggccgctgccaccaatggaaaggttgat
ttggcctctcaatgggaggatcccatggcagaccccgacaagcgcaagtttgcggccgac
atgcgacgtaccatgcagaaccgtcccagtgaagccgtcccagaatggaggcaagcaatc
gcacccaagaaccagtcttttggcaaacgcaccaacatgaccatcaagcagcaaagagag
tcactgcccgtctttgcattccgtgagcagttgatcaaggccgtcaaggaaaatcagatt
atgatcgttgtcggtgaaacaggatctggaaaaacgactcagttgactcagtatctagcc
gaggccggctttgctaacgagggtgtaattgggtgtacacaacctcgtcgtgtggcagcc
atgtcagtcgcaaagcgtgtgtctgaagaggtcggctgcgagcttgggcaggaggtcggc
tacacgatccgtttcgaagactgcactagccctgccacgagaattaagtacatgacggac
ggtatgcttcagcgtgagattgttatcgaccctgatctgaagcgatattcggtcatcatg
ctagacgaggctcacgagcggaccattgccacggatgttctctttgctctcctaaaaaaa
gccacaaggcgaaggcctgatctcaaaattatcgtcacatcagctacgcttgatgctgac
aagttttcggcctatttcaacgaatgtcccattttcacgatcccgggtcgaacattccct
gtcgaaattctttactcaaaagacccagaatcggattacctcgatgctgcgttgacaacc
gttatgcagatccacattgacgaaccccccggagacatcctgctgttccttacgggtcag
gaagaaattgataccagctgcgagattctatttgaacggatgaaagcattagggccttcg
gtccccgaactaattattttacccgtatattctgcgctccctaacgagatgcagagtcgc
attttcgatcctgcaccacctggcagcagaaaggtcgtcattgcaaccaacattgccgag
acctccattaccatcgaccatatctactacgtcgtcgaccccgggttcgttaagcagaac
gcctacgatcccaagctcggtatggattcgcttgttgttacgcccatttcccaggctcaa
gcaaaccagcgtgccggtcgtgccggacgtaccggtcccggtaaatgcttccgtctctat
accgaagctgcttatcagacagaaatgttaccgacttcaatccctgaaatccaacggcaa
aacttgtccaacaccattttgcttctcaaggccatgggtatcaacgaccttctacacttt
gacttcatggacccgccacccatcaacacaatgttgacagctttggaagagctatacgcc
ctctcggctcttgacgatgaagggcttctcactcgactcggccgcaaaatggctgacttc
cccatggaaccatcactgtccaaagtcttgattgcatcggtagagatgcgttgctccgac
gagatgctcagcatcgtcgccatgctgaacttacccaatgtattttacagaccgaaagag
aagcaaacgcaggcagacgccaaaaaggcaaagtttcacgaccccaatggcgaccacctg
accctgctcaacgtctataatgcttggaagcaaagccgatacagcaaaccctggtgcgcc
gagaactttattcagttccgggcgttgacgcgcgcgcgagatgtgcgaaaccaaatcgaa
agaatcatgcagcgcttcaagtaccaggtgatgtcgtgcggatccgatacgaaccgtgtc
cgacaggcgctatgctccggtttcttccgtaatgcagcacgcaaggaccagcaggaaggt
taccgtacactgatcgagggtacgccggtgtacctgcacccgtcctcggcgctctttgga
aagcacgccgagtgggtcatataccacacgctggtgctaactacgaaggagtacatgcac
tgcacgacaagcatcgagcccaagtggctggtcgacgcagcccctaccttcttcaaggta
agcgcgtccgacaagctgagcaagaggcgacaacaggagaggatccagccgctgtacaac
aaattcgagggcgagaacgactggcggctcagcgcacagcggagggcgggaaggggtggt
ggtggtggtggcacttggggttaa
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integrated database retrieval system
