Pyricularia oryzae: MGG_12899
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Entry
MGG_12899 CDS
T01027
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MGG_12899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgr03400
]
MGG_12899
Enzymes [BR:
mgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MGG_12899
DNA repair and recombination proteins [BR:
mgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
MGG_12899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
2675754
NCBI-ProteinID:
XP_003712808
UniProt:
G4N5E4
LinkDB
All DBs
Position
3:5155310..5159650
Genome browser
AA seq
1001 aa
AA seq
DB search
MSRIKREDTSQEAVDEDSLQYSFGDAGLGEVDEKYPNRPRNHSQTLVFSELFTNLFNPLN
EHKNRRGPGGPAGRKGGPRLSPHEQRRLIIRRFIDRWRSEVGNDFYPALRLILPDKDRDR
GVYGLKESAIGKLLVKLIKIAPDSEDGQNLLKWKLPGQTFASRMAGDFAGRCFETLSKRQ
MRMTPGDMRIGEVNSLLDKLAAASGEAEQLPIFQTFYERMNAEEMMWLIRMILKAMKIGA
SERTFLYQWHPDAEALFNVSSSLRRVCWELYDPALRLEQEDTRVTLMQCFQPQLAQFQPH
SPNFATMVQDLGVTDEDRRFWIEEKLDGERMQLHMIDDDDHPGGKRFSFWSRKGKDYTYL
YGNGFQDDNSALTRHLSDAFDPRVSNLILDGEMVTWDPKIDKMVPFGTLKTAALLGQKTP
FDDTNERPLFRIFDILYLNDTALTKNSLQDRRKALAQVVRDVHRRLEIHPYEEATSADAV
EPLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVIGGYYGSG
HRGGTISSFLCGLRVGENHIKAGANPEKCISFFKVGGGFKAEDYAQIRHLTEGKWMDWDP
KKPPSEFIELGGGEKYQYERPDVWIRPKDSIVVSVKAASIGASPQFAMQITLRFPRFRRL
RTDRTWDSALDVDDFMKLKEDAEQQVKEKKEMKIEDRKRRPQKRARREILIAGQDPDTAM
ADQKPAAGQAQTGRTRSVFEGRKFCVMTDCVKPIRKTKAQLESLIKAHGGTLSQQTDPQP
WKYLIADKYGIKVASLLKRDSEVDIIRPNWVLDCLDQDGVEFLLPFEEKHLLNASEATKQ
TAEFQVDEYGDSYMRAVDVDELKQIAEGIPKFEDADSFDVDEFLDSLESAGCEMTGLGFV
FRRCIVLVAGVAGTPKHYLDILRSYIRFGGGTVVDNLQSQGLTHVVVAGDSNEGAAAREL
AAELRHRISLLRRPPRLVTRQWVDESWKEKTLLDEEAYVPL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaattaaacgggaggacacctcccaagaggcggttgatgaagattccctgcaa
tacagctttggtgatgctggcttgggagaagtcgatgagaaataccctaatcgtccccgt
aatcactcccagacactggtcttctccgaactgttcacgaatctcttcaaccctttgaat
gagcacaaaaaccggagaggtcccggtggccctgcaggccgcaagggcggcccgaggctg
tctcctcacgaacaaagacgcctcatcatcagacgcttcatcgaccgctggcggtccgaa
gttggcaatgatttctacccggctctgcgactgatactgcccgacaaggaccgcgatcgc
ggtgtctacggcctcaaggaaagcgcaatcggaaagcttctagtgaagttgatcaagatt
gcaccagactcggaggatggtcaaaaccttctcaaatggaagctcccgggccagaccttt
gccagccgcatggcgggtgattttgccggcagatgctttgagacgctatccaaaagacag
atgcgcatgaccccaggggatatgcgtattggagaagtcaactcgctgctcgacaaactg
gcagccgcttcaggagaggccgagcagctacccatttttcaaaccttctatgagcgcatg
aatgcagaggagatgatgtggctcattcgcatgatcctcaaggccatgaagattggtgca
agcgaacgcacatttctatatcagtggcacccggacgccgaagctctgttcaatgtcagc
tccagcttgcgccgtgtgtgctgggagctgtatgatcccgcactccgtctggagcaggaa
gataccagagtgactttgatgcaatgctttcagccccagctggcccagtttcagcctcac
tcacccaactttgctacaatggtccaagacctcggagtcaccgacgaagaccggagattc
tggatcgaggaaaagttggatggcgagcggatgcaattgcatatgatagatgacgacgat
catccaggaggcaagcgcttctctttctggtctcgaaagggcaaggactacacctacctc
tacggcaatggatttcaagacgacaactccgcactgaccaggcatttatccgatgctttc
gacccgcgagtttccaatctgattttggacggcgagatggtcacttgggatccaaagatc
gacaagatggtaccttttggtacactcaagacggccgccttgctcggtcaaaagacacca
tttgacgacacaaacgagcggcccctcttccgcattttcgacatattgtatctgaatgac
acagcgctgaccaaaaactcgttgcaagatcgccgcaaggcgctagcccaggttgtccgt
gatgtccatcgtaggctcgaaattcatccctacgaggaagcaacttcggccgatgccgtc
gagccgctgttgcgcaaggttgtagctgattcctcggagggtcttgtgctgaagaatcca
agatcagtatatcgtctgaacagtcgaaataatgattggatcaaagtgaaaccagagtac
atgtctgagtttggcgagtcactggactgtgtggtcattggcggctattacggctcagga
catcggggcggtaccatctccagttttctttgtggcctcagagttggcgagaaccacatc
aaggccggtgccaatccagagaaatgcatcagttttttcaaggttggcggtggcttcaaa
gccgaggactatgcgcagatccgccatttgacagagggcaaatggatggactgggaccca
aagaagcccccaagcgagtttattgagctcggtggcggcgagaagtaccagtacgaacga
cctgacgtctggatccgaccaaaggactccatcgttgtctcggtcaaggcggccagcatc
ggcgcttcccctcagtttgccatgcagattaccctccgtttcccgaggttccgacggctg
cggaccgataggacatgggactctgctttggatgtagacgatttcatgaagctcaaagaa
gatgctgagcaacaagtcaaggagaaaaaggaaatgaagattgaagatcgtaagcgcagg
ccgcaaaagagggccaggcgcgagatcttgatcgctggacaagatccagacacagccatg
gctgatcaaaagcctgcagctgggcaggcacagacaggtcggacaaggagcgtgtttgaa
ggccgtaaattctgtgtcatgactgactgcgtcaaaccaattagaaagaccaaggctcag
ctcgagtctttgataaaagctcatggcggaaccctctctcagcagacggatccccagcct
tggaagtacttgatcgcggataaatatggcatcaaggtggcgagtcttctcaagcgtgac
agcgaggtggacattatcaggccaaattgggtcttggactgtcttgaccaagacggcgtt
gagtttctcctgcccttcgaggaaaaacatctcctcaatgcttcggaagctaccaaacag
actgctgagtttcaggtggatgagtacggcgacagctacatgcgcgctgtggatgttgat
gagttgaagcagatagcagaaggcattcccaagtttgaggacgcagacagctttgatgtc
gacgagtttctggatagcttggaatcagccggatgtgagatgacgggacttggcttcgta
ttcaggcgctgcatcgtactcgttgctggtgtggccgggacgccaaagcactaccttgac
atactacgaagctatatccgtttcggcggcgggaccgtggtggacaatttgcagtcgcaa
ggcctcacgcacgtcgtggtggcgggtgactctaacgagggggcggccgctagggagttg
gcagctgagttgaggcaccgcataagcctgttacgacggccgccgaggctggtcacgcgg
cagtgggttgacgagagctggaaggagaagactctactagacgaggaggcatatgtgccg
ttatga
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