Mannheimia granulomatis: A4G16_05505
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Entry
A4G16_05505 CDS
T06759
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mgra
Mannheimia granulomatis
Pathway
mgra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4G16_05505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgra03400
]
A4G16_05505
Enzymes [BR:
mgra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4G16_05505
DNA repair and recombination proteins [BR:
mgra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4G16_05505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_25
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIM66864
UniProt:
A0A6G8JIK5
LinkDB
All DBs
Position
complement(1170183..1173710)
Genome browser
AA seq
1175 aa
AA seq
DB search
MKKLNPIDLPLNKSVLIEASAGTGKTFTIANIYLRLLLGVGCLPLTVEQILVVTFTKAAT
EELKDRIRKNIQQCADFLQDKSNGLDTQSKERFYHSNLDFLTQLYPKIENIHEALLRLNI
AEREMDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQSELFKKLSEEVWREQFYPQN
LVATEVISAELSTPLAALAAVKPYINGELPKAAKVENFVTALEKYNHFIAEIKADWQANS
EELVNLIRNDLAQKITLHGGWYKATAFEEAVLVMNQWADSNNRYLPEEFYLFTADRIAAG
TKKNCEPMRTAHLVKNQAFWTAYKQDFAQSLSSVLLYQFLVALKEKLSDYKQNHPERSFD
DLLTMLNHALKEPDTGKALAQKIRAIYPFAMIDEFQDTDLTQYEIFSQIFMADGKGNGFI
MIGDPKQSIYKFRGADIFTYLSAAKQANEQFTLGKNWRSLPPVVQAVNNLFHFANSEHSP
FIYQGISFHPVEADDSKGNLVSEQGHFVCYTTEKTKLDDFAEICAYQIHQQLKAMAEGKF
GLEKGKEFKAFAAKDIAILVRKGSQAKRIKTALEKRNIKSVYLAESASVFSSEIATELYW
LLQAGLNPYNTKTLFSALGSTLWGLSAAEIYRYKTDEILLDIKVNQFVEYNTIWKEQGIL
PMLHKLYLEQGIIQRLKGMQGSDRLITDLLHLTEILQEQSQSLESEAELVRWYERQIQSP
DYEDEQQLRLESEEELIKIVTIHGSKGLQYPIVWLPFASQKSDSNNLGNLGVFRNENGEI
DWYVGSIDENVQQSLQNEEYAEDLRLFYVALTRAESQINLILPSEISGWSPLHYLLSEGG
TAEKVVVAEALSSKAILDKPIKLSNELPFERWEQVEQRKNYQAKSFEGNIRVVGQITSFS
SLYAQHERLSKGKSNRVANFAQDRDENVEIFETDYVGEFSVFSPYHFPHGTKVGTVLHSF
FEHCRFGQPIEQESVAKMCEQLDLSEAWIEPAMQWLERILATPLAGAGFSLNEVNEEQRL
NEWQFYLRLKNDKALVLLNKLLKQHTILAKHFPALQFPQLEGFVRGFVDCIVQMNEKFYV
IDYKSNFLGHLPQNYAFEHIQREMGKHRYDVQYLLYTLAVHRYLTSRLGENYDYERNFGG
AVYLFIRAMDGKSENGVYFDKPSKALIEEIDRLFG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcaatcctattgatttacctttaaataaatcggtattaattgaagcttca
gccggtacaggtaaaaccttcactattgccaatatctatttacgtttattgctaggggta
ggttgtttgcctcttacggtagagcaaattttagtggttacttttaccaaagcggctact
gaagaactaaaagatcgaattcgtaaaaatattcagcaatgtgctgattttttacaagat
aaatcaaatggattagatactcagagcaaagagaggttttaccatagtaatcttgatttt
ttaactcagctgtatccaaaaattgagaacattcacgaggctttattacgcttaaatatt
gccgagcgagagatggatactgcaagtgtattcactattcacggcttttgccagaaaatg
ctggtacagtttgcatttgaatctggtgttcggtttgatttagatttacagccaaatcaa
agcgagctatttaaaaaattaagtgaagaggtatggcgagagcagttttatccgcaaaat
ttagtcgcaacggaggtgatttctgctgagcttagtacgcctttagcagctttggctgca
gttaagccttatataaacggagaattgcccaaagcagcaaaagtagaaaattttgttact
gctttagaaaaatataatcattttattgctgaaattaaagccgattggcaagcaaatagt
gaggaattagtaaacctcatccgtaatgatcttgcccaaaaaattactttgcacggtggt
tggtataaagctacagcttttgaagaagcagtgctggtgatgaaccaatgggcagattct
aacaatcgttatttacccgaagaattttatttatttactgcagatagaatcgctgccggc
acgaagaaaaactgtgagccgatgagaactgctcaccttgtaaaaaatcaggctttttgg
accgcttacaaacaggatttcgcacaaagtttatcttccgtgctattgtatcaattttta
gtagcgttaaaagaaaagctctctgactataagcaaaatcacccggagcgtagttttgat
gatcttttaaccatgctgaatcacgccttaaaagagccagacacaggtaaagctttagca
cagaaaattcgagcgatttacccttttgcgatgatcgatgaatttcaagatacagacctc
actcaatatgagatttttagccaaatttttatggcagacggtaaagggaatggctttatt
atgattggcgatcccaaacagtctatctataaattccgaggcgcagatatcttcacttac
ttaagtgcagctaagcaggcaaatgaacagtttactcttgggaaaaactggcgttctttg
ccacctgtggtgcaagcggtcaataatttgtttcattttgcaaatagcgaacattcccct
tttatctatcaaggcattagttttcatcctgttgaagcagatgattcaaagggaaatctt
gtgagtgagcaaggacattttgtttgctataccactgaaaaaacaaaattggatgatttt
gctgaaatctgtgcttatcaaatccatcagcaattaaaagcaatggcagagggcaaattt
gggcttgaaaaaggtaaggaatttaaagcgtttgcagcgaaagatattgcgattttagtg
cgtaaaggttctcaagcaaaacgtattaaaacagccttagaaaaacgcaatattaaatca
gtctatttggcggaatcagcaagtgtatttagttcggaaattgccaccgaactttactgg
ctactgcaagccgggttgaatccctataataccaaaacattgttttctgcgttaggttca
acgctttgggggttgagtgctgcggaaatttatcgttataaaacagatgaaatattactt
gatattaaagtaaatcagtttgtggaatataacacaatttggaaagagcaaggcattttg
ccgatgttgcataaactctatcttgaacaaggtattattcaacgtttgaaaggaatgcag
ggctcagatcgattgattacggatttattgcatttaaccgaaattttgcaagagcaatcg
caatcgttggaatctgaggcagaacttgttcgttggtatgagagacaaattcagtcccca
gattatgaagacgagcagcaactgaggctggaaagcgaggaagagcttattaagattgtg
accattcatggttcaaaaggattgcaatatccaattgtttggttgccgtttgcttcacaa
aaaagtgacagtaataatttaggcaatttaggtgtatttcgcaatgaaaatggagaaata
gattggtatgtgggttcaattgatgagaatgtacagcaatctctgcaaaatgaagaatat
gcggaagacttacgtctattttatgtagcattaactcgggctgaatctcagattaatttg
attttaccctctgagatttcaggttggagtccgctacattatttgttaagtgaaggagga
acagcggagaaagtagttgtggctgaggccttatctagcaaagcgattttggataagccg
attaagttgagtaatgaattaccgtttgagcgctgggaacaagttgagcaaagaaagaat
tatcaagcaaaaagctttgaaggtaatattcgtgtagtggggcagattaccagcttttca
tctctctatgcacaacatgagcgtttaagtaaaggtaaaagtaatcgggtagcgaatttt
gcacaagatcgcgatgagaatgtggaaattttcgaaaccgattatgtcggagaatttagc
gtattttctccataccactttccacatggtacaaaggttggaacggtgttacatagtttt
tttgagcattgtcgctttggacaacctattgaacaggaaagtgtagcaaagatgtgtgag
cagcttgatttatcagaagcgtggattgagcctgcgatgcaatggttggagcgtatttta
gcaacaccgttagcgggagcaggttttagtttaaatgaggtgaatgaggagcagcgtttg
aacgaatggcagttctatctgcgtttaaaaaacgataaagcgctagtgcttctcaataag
ctgcttaaacaacacactatattggctaagcatttcccagcacttcaatttccgcagctg
gaaggatttgtacgagggtttgttgattgtatagtacagatgaacgagaagttctatgtg
attgactataaatcaaactttttggggcatttgccacaaaattacgcttttgagcatatt
cagcgggaaatgggcaaacatcgttatgatgtgcaatatttactttatacccttgctgtt
catcgttatttaacttctcgattaggtgaaaattatgattatgaacgcaatttcggtgga
gctgtctatcttttcataagggcaatggatggtaagagtgaaaatggtgtttattttgac
aagccaagcaaagccttaatagaagagatagatcggttatttgggtag
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