Magnetospirillum gryphiswaldense MSR-1: MSR1_11820
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Entry
MSR1_11820 CDS
T05662
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSR1_11820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_11820
Enzymes [BR:
mgry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSR1_11820
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSR1_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3054
Motif
Other DBs
NCBI-ProteinID:
AVM73677
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All DBs
Position
1170148..1170789
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AA seq
213 aa
AA seq
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MTLFTGPAADCRLCPRLVEYRRANQAAFPDWHNAPVDSFGSLDARILFIGLAPGVRGANR
TGRPFTGDYAGDLLYSSLLKYGLARGEYRADPDDGFELVGARICNAVRCVPPENKPLPSE
FKACLPFLSQELAAMPSLRALFAIGRNAHEVALTTLGLKKSAYPFAHGAMHELGKGLILV
DSYHCSRYNTNTGRLTEAMFHQALETLLDSIKS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctttttaccggtccggcggccgattgccgcctttgtccgcgcttggtcgagtat
cgccgggccaatcaggccgccttccccgactggcataacgccccggtggactcgttcggt
agcctggatgcccgcatcctgttcattggtctggctccgggggtacgcggcgccaaccgc
accgggcgcccgttcaccggcgattatgccggcgaccttttgtattccagcttgttgaaa
tacggtctggcccggggcgagtaccgtgccgatcctgacgacgggtttgaactggtcggc
gcccgtatctgcaacgcggtacgctgcgtgccgcccgagaacaagccattgccgtcagag
ttcaaggcctgcctgccattcctgagccaggaactggccgccatgccctctcttcgcgcc
ctgttcgccatcggtcgcaacgcccacgaagtggcgttgaccaccttggggctgaaaaaa
agcgcttacccctttgctcatggcgccatgcacgaattgggcaaaggactgatcttggtc
gatagctatcattgctctcgctacaacaccaataccgggcggctgaccgaggccatgttc
catcaggcgctggagactttgctggattccatcaagtcttaa
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