Magnetospirillum gryphiswaldense MSR-1: MSR1_35390
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Entry
MSR1_35390 CDS
T05662
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00540
Lipopolysaccharide biosynthesis
mgry01100
Metabolic pathways
mgry01250
Biosynthesis of nucleotide sugars
Module
mgry_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MSR1_35390 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mgry01005
]
MSR1_35390 (hldD)
Enzymes [BR:
mgry01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MSR1_35390 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
mgry01005
]
Core region
MSR1_35390 (hldD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AVM76000
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All DBs
Position
complement(3713059..3714045)
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AA seq
328 aa
AA seq
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MIVVTGGAGFIGSNILAALEARDAGKLVVCDRLRSNDKWKNVAKRELADIVHPEQLFDFL
EANRKHVQVIFHMGAISATTETDGDKIAANNFSLSLALWKWCALSNVRFIYASSAATYGD
GSFGFDDDWSIDHLAKLQPLNAYGWSKHLFDRRVARKIQQGSRKPPQFAGLKFFNVYGPN
EYHKGGQQSVVSQIYPHAKQDAAYQLFRSHNPQYKDGGQMRDFIWVEDCVDVMMWLLDTP
QVNGIFNVGTGKARSFIDLASQVYKALGKEPKIKFQDTPVAIRDKYQYFTQASEKNLRAA
GYTRAFTSLEEGVTKYVQHFLDRPDRYK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtcaccggaggcgccggctttatcggttccaacatcctggccgcgctggaa
gcgcgtgatgccggcaaactggtggtatgcgaccgcctgcgctccaacgacaaatggaag
aacgtcgccaagcgcgaactggccgacatcgtccaccccgagcaattgttcgacttcctc
gaagccaatcgcaagcacgtccaggtcatcttccacatgggagcgatttccgccaccacc
gagaccgatggcgacaagatcgccgccaacaatttctcgctgtccctggctttgtggaaa
tggtgcgccctgtccaacgtgcgcttcatctatgcgtcgagcgcggccacctatggcgac
ggctcgttcggtttcgacgacgattggtccatcgaccatctggccaagctgcaacccctg
aacgcctatggctggtccaagcacctgttcgaccgccgcgtcgcccgcaagatccagcag
ggatcacgcaagccgccgcaattcgccggcctcaagttcttcaacgtctacggccccaac
gaatatcacaagggcgggcagcaaagcgtggtgtcgcagatttatccgcacgccaagcag
gatgccgcctatcaactgttccgttcgcataacccgcaatacaaggatggcgggcagatg
cgcgatttcatctgggtggaagattgcgtcgacgtaatgatgtggctcttggacaccccc
caggtcaacggcatcttcaatgtcggcaccggcaaggcccgctcgttcatcgatctggcg
tcgcaggtgtacaaggcgctgggcaaggaacccaagatcaagttccaggacaccccggtc
gccatccgcgacaaataccagtacttcacccaggccagtgaaaagaacctgcgggcggcg
ggctatacccgcgccttcaccagcctggaagaaggcgtcaccaaatacgtgcagcacttc
ctggaccgtcccgaccgctacaagtaa
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