Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__2500
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Entry
MGMSRv2__2500 CDS
T02960
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00470
D-Amino acid metabolism
mgy00550
Peptidoglycan biosynthesis
mgy01100
Metabolic pathways
mgy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MGMSRv2__2500 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MGMSRv2__2500 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MGMSRv2__2500 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgy01011
]
MGMSRv2__2500 (ddl)
Enzymes [BR:
mgy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MGMSRv2__2500 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgy01011
]
Precursor biosynthesis
Amino acid ligase
MGMSRv2__2500 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
B12-binding
ATP-grasp_4
GARS_A
Peripla_BP_6
NAD_binding_8
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
CDK99715
UniProt:
V6F2G2
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All DBs
Position
2608900..2609820
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AA seq
306 aa
AA seq
DB search
MSRRVTVLMGGASAERDVSLRSGAAAAAALEQAGFTVATIDAGRDVTALAQAITASRPDV
VFNALHGRFGEDGCVQGLLNLLGIPYTHSGLLASAAAMDKAFSRQVFQQAGIPVAHGVVV
EKTDGGADPMKRPFVVKPINEGSSVGVYVMKPGDNRAPLADWPFESDRVLVEEFVPGREL
TVAVMGDRALGCLEITSERGFYDYDAKYAPGGSKHIMPAPIPAEDYAEACRLAVEAHRVL
GCRGVSRADLRYDDTKPGQKPRLIVLEVNTQPGMTATSLVPDIASYCGISFPELVRWMVE
QAECDG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcgtcaccgtgctgatgggcggagcctccgccgaacgcgacgtgtcgttg
cgctcgggcgccgccgccgccgccgctctggaacaggccggcttcaccgttgccaccatc
gatgccgggcgcgatgtgacggccttggcccaggccatcaccgccagccgtcccgacgtg
gtgttcaacgcgctgcatggccgtttcggcgaggatggctgcgtccagggtctgctcaat
ctgctgggcatcccctatacccattccggcctgttggcctcggccgccgccatggacaag
gcgttttcgcgccaagtgttccagcaggccggcatcccggtggcccatggcgtggtggtg
gaaaagaccgatggcggcgccgaccccatgaagcgtccgttcgtggtcaagcccatcaac
gagggctcgtccgtcggcgtctatgtgatgaagccgggcgacaaccgcgcccccctggcc
gattggccgttcgagtccgaccgcgtgctggtggaagaattcgtccccgggcgcgagctg
accgtggcggtgatgggcgaccgcgccctgggctgtctggaaatcacctcggaacgcggc
ttctacgattatgacgccaaatatgcgccgggcggctcgaagcacatcatgcccgccccc
atcccggcggaagattacgccgaagcctgccggctggcggtggaagcccatcgcgtgctg
ggctgccgcggcgtgtcgcgcgccgatctgcgttacgacgacaccaagcccgggcaaaag
ccgcgtctgatcgtgttggaagtcaacacccagccggggatgaccgccacctcgctggtc
cccgacatcgcgtcttattgcggcatcagcttccccgagttggtgcgctggatggtcgag
caagcggagtgtgacggatga
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