Marinobacter nauticus ATCC 49840: MARHY0005
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Entry
MARHY0005 CDS
T02083
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B (type II topoisomerase)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhc03032
]
MARHY0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY0005 (gyrB)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MARHY0005 (gyrB)
DNA replication proteins [BR:
mhc03032
]
Prokaryotic type
DNA Topoisomerases
MARHY0005 (gyrB)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MARHY0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF2150
Motif
Other DBs
NCBI-ProteinID:
CCG93509
UniProt:
H8WA84
LinkDB
All DBs
Position
5472..7886
Genome browser
AA seq
804 aa
AA seq
DB search
MSESNYNSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGYCSEI
GIIIHPDESITVKDNGRGIPVDLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSSSLTLTIRRDGKVYEQSYTHGVPNAPLGEVGETDASGTKVHFIPSPETFTHI
QFHYDILAKRLRELAFLNSGVRIRLTDERSGKEEIFEYEGGLRAFVEHLNTNKTAINRVF
HFNREREDGIAVEVAMQWNDAFQENIYCFTNNIPQRDGGTHLAGFRAALTRSLNNYIDHE
GLGKKAKVATSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQELYQSFAEY
LQEQPNEAKQIVNKMIEAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPALSEL
FIVEGDSAGGSAKQGRDRKTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNPDKLRYHSIIIMTDADVDGSHIRTLLLTFLFRQMREIIERGHVFIAMPPLYKVKRG
KQEQYLKDEKAKEAYLTQTALEGAQLYVNPEAPAIKDSALETMVKDYQAVMAMIDRLSRA
YPAKVLQQMVYNSTLKPEHLRDETEVARWVARLGEGLDLDTRTGTKYTFSVTRDEERGLY
LPKVTIFVHGIPHEHVFSHDFFESSSYGAIARLGETLEGLIEDGAYIQRGERKQSVLSFE
GALEWLMKEAQRGLNIQRYKGLGEMNPDQLWETTMDPETRRMMKVTIEDAIAADQIFTTL
MGDDVEPRRDFIQSNALEVTNLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcgaactacaattcctccagtatcaaagtcctcaaaggactcgacgcggtg
cgtaaacggcccggtatgtacatcggtgataccgacgatggcaccggcctgcatcacatg
gtctttgagttggtggataactccatcgatgaggctctggctggttactgttctgaaatc
ggcatcatcatccacccggacgaatccattacagtaaaagacaatggtcgcggtatcccg
gtcgatctacatgaagaggaaggtgtttcggccgccgaagtcatcatgactgtgttgcat
gccggcggtaagttcgacgacaactcctacaaggtctccggcggtctgcacggtgtgggt
gtgtctgtggtcaacgccctgtcttcctcgctgaccctcaccatccgccgggatggcaag
gtctatgagcagagctacacccacggtgtacctaatgcgcccctgggcgaagtcggtgaa
accgatgcctccggtaccaaggttcactttattccctctccggaaaccttcactcatatc
cagttccattacgacatcctggccaagcgcctgcgggaactcgctttcctgaacagtggt
gtgcgtatccgcctgacggatgagcgttcaggcaaggaagagatctttgagtatgaaggt
ggtcttcgggcctttgtagagcacctgaataccaacaagacggccatcaaccgtgtcttc
catttcaaccgtgaacgggaagacggcattgcggtggaggtggccatgcagtggaacgat
gccttccaggaaaacatctactgcttcaccaacaatattccccagcgtgatggtggtact
catctggccggtttccgggcagcactgacccgctctctgaacaactacattgatcatgaa
ggcctgggcaagaaagccaaggttgcgacctccggtgatgatgcccgggaaggtctgacc
gctatcatcagtgtgaaagtgcccgatcccaagttctcctcccagaccaaggacaagctg
gtgtcctcggaagtgaagacggcggtggagcaggaactgtatcagagctttgcggagtac
ctgcaggagcaacccaacgaagccaagcagatcgttaacaagatgatcgaagcggcccgt
gccagggaagcagcccgtaaggcacgggatatgacccgccgcaagggtgccctggatatc
gctggcctacccggcaagctggcagactgccaggaaaaagaccctgccctctccgaactg
ttcattgtggagggtgattctgcgggtggtagtgccaagcagggccgtgatcgtaagacc
caggccatcctgcccctgaaaggtaagatcctgaacgtcgagaaagcccgctttgacaag
atgctgtcctctgccgaggtcggcaccctgatcaccgcgctgggttgtggcatcggccgc
gaagaattcaacccggacaaactccgttatcactccatcatcatcatgaccgatgccgat
gtggacggttctcacatccgtactctgctgctgaccttcctgttccgccagatgcgggaa
atcatcgagcgcggccatgtattcatcgccatgccgccgctgtacaaggtcaaacgtggc
aaacaggagcaatacctgaaggacgagaaggcgaaagaagcctatctgacccagacggct
ctggaaggcgcccagctgtatgtaaacccggaagcaccggccatcaaggattccgccctg
gaaaccatggtgaaggactatcaggcagtgatggcgatgatcgatcgcctgtcccgggcc
tatccggccaaggtactgcaacagatggtctacaacagcacgctcaagccggaacacctg
agggacgagaccgaagtggcccgctgggtggcgcgcctgggtgaaggtcttgatctggat
acccgaaccggtaccaagtacaccttctctgtgactcgcgatgaggaacggggcctgtac
ctgcctaaggtcaccatctttgtgcatggcattccccatgagcatgtgttcagtcatgac
ttctttgagtcttcttcgtacggtgccattgcgcgcctgggcgagaccctggaggggctg
atcgaggatggcgcctacatccagcgtggcgagcgcaagcagtctgtgctgtcctttgag
ggcgccctggagtggctgatgaaggaagcccagcgtggcctgaacatccagcgatacaag
ggtctgggtgaaatgaacccggatcagctctgggaaaccaccatggatccggaaacccgc
cggatgatgaaggttaccattgaggatgcgattgctgccgaccagatcttcaccacactg
atgggggatgatgtggagccacggcgggacttcatccagagcaacgcgctggaagtaacc
aacctggatatctga
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integrated database retrieval system
