KEGG   Methanosaeta harundinacea: Mhar_1487Help
Entry
Mhar_1487         CDS       T01990                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mhi  Methanosaeta harundinacea
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhi00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Mhar_1487
   03410 Base excision repair
    Mhar_1487
   03420 Nucleotide excision repair
    Mhar_1487
   03430 Mismatch repair
    Mhar_1487
Enzymes [BR:mhi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mhar_1487
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mhar_1487
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mhar_1487
DNA replication proteins [BR:mhi03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mhar_1487
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mhar_1487
DNA repair and recombination proteins [BR:mhi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mhar_1487
   NER (nucleotide excision repair)
    Other NER factors
     Mhar_1487
   MMR (mismatch exicision repair)
    Other MMR factors
     Mhar_1487
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1610761..1612443)
Genome map
AA seq 560 aa AA seqDB search
MTSFESFAELCARIEEIGGSIEKADLLASFLRDLEEEELSVVPSFVMGSPFPASSDLLLG
VGPSTLYDALSKAFGAAPSEVQELLRRTGDVGAVAAELAKKGRSSTLSTFLEGERLTILE
VHSRFLLIARASGRRSQTAKMKHLRYLFSEAGATEARYMARLALEDMRIGVGEGIVRDAV
AKAFGISPEEVERGYNFTSDLGLVARQAKEGRLQELTIEIGRPIKMMLAQLGSGIAGSVA
EMGTAAVEVKYDGSRVQIHKRGEEVEIFSRRLERVTRSLPEIVSFVKEGVRAEAAILDGE
AVARGEDGRPLPFQEILKRFRRKYRVEGAAKRIPLELMLFDLIYLNGRVLIDEPLRERRR
LLESVADEKILAGQKVTDDPEEVAGIYEEAIAEGHEGVMLKSPESPYAPGKRGKNWLKIK
PVMETLDLVVIGARWGEGRRATFFGSYRLASPDPETGRLEDVGWVATGITDEMLAELTEL
FRDLVLVAGEGMEVEVKPEVVFEVAFEEIQKSKSYSSGYALRFPRLVRIRDDKAVEEADT
LDRVAGLYATQRGRNGRSSG
NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt
atgaccagcttcgaaagcttcgcagagctctgcgcgaggatcgaggagatcggcggctcc
atcgagaaggccgacctcctcgcctccttcctccgggatctggaagaggaggagctctcg
gtcgtcccctcttttgtgatggggtcccccttcccggcgagctccgaccttctcctgggg
gtgggaccgagcaccctctacgacgccctctccaaggccttcggggcggccccctccgag
gtccaggagctcctccggaggacgggagacgtgggggcggtggcggcggagctggcgaag
aaggggaggtcctccaccctctcgaccttcctggagggggagaggctcacgatcctcgag
gtccattcccggttcctcctcatcgcccgggcatcggggcggaggagccagaccgccaag
atgaagcacctccgatacctcttcagcgaggccggggcgacggaggcgaggtacatggcg
aggctcgccctggaggatatgaggatcggggtcggcgaggggatcgtccgggacgccgtc
gccaaggccttcggaatatcgccggaggaggtggagcgggggtacaacttcaccagcgac
ctcggcctagtagcccggcaggcgaaggagggtcggctccaggagctgacgatcgagatc
ggtcgacccataaagatgatgctcgcccagctcgggtccgggatcgcagggtcggtggcg
gagatggggacggcggccgtcgaggtgaagtacgacgggtcccgggtccagatccacaag
aggggagaggaggtggagatcttctcccgccggctggagagggtgacccgctccctcccc
gagatcgtatccttcgtaaaagagggggtccgggcggaggccgccatcctcgacggggag
gcggtggcccggggcgaggacggaaggcccctgcccttccaggagatcctgaagcggttc
cggaggaagtacagggtcgagggggcggcgaagaggatccccctggagctgatgctcttc
gatctcatctatctcaacggccgggtcctcatcgacgagcccctccgggagaggagaagg
cttctggagtcggtggcggacgaaaagatcctagcaggccaaaaggtgaccgacgatccc
gaggaggtggccgggatctacgaggaggcgattgcagaaggccacgagggcgtcatgctg
aagagccccgagtccccctacgcccccggtaagaggggtaagaactggctgaagataaag
ccggtgatggagaccctcgacctcgtcgtcatcggagcccggtggggggaggggaggagg
gcgaccttcttcggctcctaccggctggcatccccggacccggagaccggccgcctcgag
gacgtggggtgggtggcgacggggatcaccgacgaaatgctcgccgagctgacggagctc
ttccgcgacctcgtcctcgtcgccggagaggggatggaggtggaggtgaagcccgaggtg
gtcttcgaggtggccttcgaggagatccagaagagcaagagctactcctccggctacgcc
ctccggttccccaggctcgtccggatcagggacgacaaggccgtggaggaggcggacacc
ctcgaccgggtggccggcctttacgccacccagcggggtaggaacggcagatcgtcgggc
tga

DBGET integrated database retrieval system